Parental gene: | LPERR02G11870 |
| Aliases: | None |
| Description: | None |
| Organism: | Leersia perrieri |
| Coordinates: | 2:9494427..9498751(+) |
>LPERR02G11870
ATGTCGACCGCCGCCACCGCGCCGCCGCCGGCCGCCGCCCTCCCGGCGGCGCCCCCGCCGTCATACCCCGCCATCTCGGC
GACCTCCGCCTCCGCCGCCGCCGCCGAGGACGACGACGACCTCTACGGCCGCCTCAAGTCGCTCCAGCGCCACATGGAGT
TCGTCGAGATACAGGAGGAGTATGTCAAGGACGAGCAGAAGAACCTGAAGCGCGAGCTCCTGCGCGCGCAGGAGGAGGTG
AAGCGGATCCAGTCCGTGCCGCTCGTGATAGGCCAGTTCATGGAGATGGTCGACGGCAACAACGGGATCGTCGGATCCAC
CACCGGGAGCAACTACTATGTTCGGATCTTGAGCACCATCAACCGCGAGCTGCTCAAGCCGTCGGCGTCCGTCGCGCTGC
ACCGTCACTCGAACGCGCTCGTCGACGTGCTGCCGCCTGAGGCGGACTCCAGCATCTCTCTGCTCGGGTCGTCGGAGAAG
CCGAACGTCACTTATACGGATATTGGAGGATGTGACATCCAAAAACAAGAAATTCGGGAGGCTGTTGAGTTACCATTGAC
GCATCATGAGTTGTACAAGCAAATTGGTATTGATCCTCCTAGAGGTGTGCTTCTGTATGGTCCGCCAGGTACTGGCAAAA
CTATGCTCGCCAAAGCTGTGGCACACCACACCACAGCTGCGTTTATCAGAGTTGTTGGTTCCGAGTTTGTGCAGAAGTAC
CTGGGTGAGGGCCCTAGGATGGTTCGTGATGTATTCCGGTTGGCTAAAGAGAATGCCCCAGCTATCATATTTATAGATGA
GGTTGATGCTATAGCAACTGCTCGTTTTGATGCTCAGACTGGTGCTGACCGAGAAGTTCAGCGTATTCTTATGGAACTGC
TTAATCAGATGGATGGATTTGATCAAACAGTGAATGTGAAGGTTATAATGGCGACCAACAGGGCAGATACTTTAGACCCT
GCTCTGTTACGTCCAGGTAGATTGGACAGGAAAATTGAGTTCCCTCTTCCTGATCGCCGGCAGAAGAGGCTTGTTTTCCA
AGTCTGTACTGCTAAAATGAACTTGAGTGATGAGGTCGATTTGGAAGATTATGTATCCAGGCCAGACAAAATTAGTGCTG
CTGATATTGCGGCTATCTGTCAAGAGGCTGGTATGCATGCTGTGCGCAAAAACCGGTATGTTATCCTCCCCAAGGACTTT
GAGAAGGGTTACCGGACCAATGTCAAGAAGCCTGAGACAGACTTTGACTTCTACAAGTGA
ATGTCGACCGCCGCCACCGCGCCGCCGCCGGCCGCCGCCCTCCCGGCGGCGCCCCCGCCGTCATACCCCGCCATCTCGGC
GACCTCCGCCTCCGCCGCCGCCGCCGAGGACGACGACGACCTCTACGGCCGCCTCAAGTCGCTCCAGCGCCACATGGAGT
TCGTCGAGATACAGGAGGAGTATGTCAAGGACGAGCAGAAGAACCTGAAGCGCGAGCTCCTGCGCGCGCAGGAGGAGGTG
AAGCGGATCCAGTCCGTGCCGCTCGTGATAGGCCAGTTCATGGAGATGGTCGACGGCAACAACGGGATCGTCGGATCCAC
CACCGGGAGCAACTACTATGTTCGGATCTTGAGCACCATCAACCGCGAGCTGCTCAAGCCGTCGGCGTCCGTCGCGCTGC
ACCGTCACTCGAACGCGCTCGTCGACGTGCTGCCGCCTGAGGCGGACTCCAGCATCTCTCTGCTCGGGTCGTCGGAGAAG
CCGAACGTCACTTATACGGATATTGGAGGATGTGACATCCAAAAACAAGAAATTCGGGAGGCTGTTGAGTTACCATTGAC
GCATCATGAGTTGTACAAGCAAATTGGTATTGATCCTCCTAGAGGTGTGCTTCTGTATGGTCCGCCAGGTACTGGCAAAA
CTATGCTCGCCAAAGCTGTGGCACACCACACCACAGCTGCGTTTATCAGAGTTGTTGGTTCCGAGTTTGTGCAGAAGTAC
CTGGGTGAGGGCCCTAGGATGGTTCGTGATGTATTCCGGTTGGCTAAAGAGAATGCCCCAGCTATCATATTTATAGATGA
GGTTGATGCTATAGCAACTGCTCGTTTTGATGCTCAGACTGGTGCTGACCGAGAAGTTCAGCGTATTCTTATGGAACTGC
TTAATCAGATGGATGGATTTGATCAAACAGTGAATGTGAAGGTTATAATGGCGACCAACAGGGCAGATACTTTAGACCCT
GCTCTGTTACGTCCAGGTAGATTGGACAGGAAAATTGAGTTCCCTCTTCCTGATCGCCGGCAGAAGAGGCTTGTTTTCCA
AGTCTGTACTGCTAAAATGAACTTGAGTGATGAGGTCGATTTGGAAGATTATGTATCCAGGCCAGACAAAATTAGTGCTG
CTGATATTGCGGCTATCTGTCAAGAGGCTGGTATGCATGCTGTGCGCAAAAACCGGTATGTTATCCTCCCCAAGGACTTT
GAGAAGGGTTACCGGACCAATGTCAAGAAGCCTGAGACAGACTTTGACTTCTACAAGTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Oryza sativa indica | BGIOSGA008091 | ortholog_one2one | 1 retrogene | |
| Aegilops tauschii | F775_28952 | ortholog_many2many | 1 retrogene | |
| Leersia perrieri | LPERR02G06920 | within_species_paralog | 1 retrogene | |
| Oryza barthii | OBART02G14640 | ortholog_one2one | 1 retrogene | |
| Oryza punctata | OPUNC02G13140 | ortholog_one2one | 1 retrogene | |
| Oryza glaberrima | ORGLA02G0127200 | ortholog_one2one | 1 retrogene | |
| Oryza sativa japonica | OS02G0325100 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_lper_5 | 52.80 | 73.99 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all LPERR02G11870 retrocopies