Parental gene:

LPERR02G11870

Aliases:None
Description:None
Organism:Leersia perrieri
Coordinates:2:9494427..9498751(+)


>LPERR02G11870
ATGTCGACCGCCGCCACCGCGCCGCCGCCGGCCGCCGCCCTCCCGGCGGCGCCCCCGCCGTCATACCCCGCCATCTCGGC
GACCTCCGCCTCCGCCGCCGCCGCCGAGGACGACGACGACCTCTACGGCCGCCTCAAGTCGCTCCAGCGCCACATGGAGT
TCGTCGAGATACAGGAGGAGTATGTCAAGGACGAGCAGAAGAACCTGAAGCGCGAGCTCCTGCGCGCGCAGGAGGAGGTG
AAGCGGATCCAGTCCGTGCCGCTCGTGATAGGCCAGTTCATGGAGATGGTCGACGGCAACAACGGGATCGTCGGATCCAC
CACCGGGAGCAACTACTATGTTCGGATCTTGAGCACCATCAACCGCGAGCTGCTCAAGCCGTCGGCGTCCGTCGCGCTGC
ACCGTCACTCGAACGCGCTCGTCGACGTGCTGCCGCCTGAGGCGGACTCCAGCATCTCTCTGCTCGGGTCGTCGGAGAAG
CCGAACGTCACTTATACGGATATTGGAGGATGTGACATCCAAAAACAAGAAATTCGGGAGGCTGTTGAGTTACCATTGAC
GCATCATGAGTTGTACAAGCAAATTGGTATTGATCCTCCTAGAGGTGTGCTTCTGTATGGTCCGCCAGGTACTGGCAAAA
CTATGCTCGCCAAAGCTGTGGCACACCACACCACAGCTGCGTTTATCAGAGTTGTTGGTTCCGAGTTTGTGCAGAAGTAC
CTGGGTGAGGGCCCTAGGATGGTTCGTGATGTATTCCGGTTGGCTAAAGAGAATGCCCCAGCTATCATATTTATAGATGA
GGTTGATGCTATAGCAACTGCTCGTTTTGATGCTCAGACTGGTGCTGACCGAGAAGTTCAGCGTATTCTTATGGAACTGC
TTAATCAGATGGATGGATTTGATCAAACAGTGAATGTGAAGGTTATAATGGCGACCAACAGGGCAGATACTTTAGACCCT
GCTCTGTTACGTCCAGGTAGATTGGACAGGAAAATTGAGTTCCCTCTTCCTGATCGCCGGCAGAAGAGGCTTGTTTTCCA
AGTCTGTACTGCTAAAATGAACTTGAGTGATGAGGTCGATTTGGAAGATTATGTATCCAGGCCAGACAAAATTAGTGCTG
CTGATATTGCGGCTATCTGTCAAGAGGCTGGTATGCATGCTGTGCGCAAAAACCGGTATGTTATCCTCCCCAAGGACTTT
GAGAAGGGTTACCGGACCAATGTCAAGAAGCCTGAGACAGACTTTGACTTCTACAAGTGA

Species Parental gene accession Homology type Retrogenes number
Oryza sativa indica BGIOSGA008091 ortholog_one2one 1 retrogene
retro_oind_47,
Aegilops tauschii F775_28952 ortholog_many2many 1 retrogene
retro_atau_13,
Leersia perrieri LPERR02G06920 within_species_paralog 1 retrogene
retro_lper_16,
Oryza barthii OBART02G14640 ortholog_one2one 1 retrogene
retro_obar_11,
Oryza punctata OPUNC02G13140 ortholog_one2one 1 retrogene
retro_opun_13,
Oryza glaberrima ORGLA02G0127200 ortholog_one2one 1 retrogene
retro_ogla_44,
Oryza sativa japonica OS02G0325100 ortholog_one2one 1 retrogene
retro_osat_48,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_lper_5 52.80 73.99
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Download FASTA sequences of all LPERR02G11870 retrocopies