Parental gene:

OPUNC02G01640

Aliases:None
Description:None
Organism:Red rice (Oryza punctata)
Coordinates:2:1133755..1138896(-)


>OPUNC02G01640
ATGCCGCTCTCCTACTCAGCCGCCGCCGCCGCCGCGCCGTCCCCTCTCGCCGCGCGCAGCCGCGGCCTCCTCCGCCGCCC
GCCGCGCTCAGCCCGCGTCGTCGTGAGATGCAAGAAGATTGATCAACTGAGGGCAGTCAATGGAATACCACCGTACTCTC
CAGTGTCTAACCGATCGTTGTTAAGTCCTGTGACGCTGCCGATTATCCGGGATGCTAACATTAAGAATGATACAAGGTTG
CGTATCTTCTCAGGCACTGCCAATCCTTCTCTTTCCCAGGAAATAGCAAGTTACTTGGGCTTAGAACTTGGGAAGATTAA
CATAAAAAGGTTTGCTGATGGCGAAATATATGTTCAGTTACAAGAAAGCGTAAGGGGATGCGATGTTTTCCTTGTGCAAC
CAACGTGCCCTCCTGCAAATGAGAATCTTATGGAACTTCTGATCATGATTGATGCCTGTAGGAGAGCATCTGCTAAGAAT
ATTACTGCAGTCATCCCTTATTTTGGTTATGCCAGAGCTGACAGGAAGTCTCAAGGCCGTGAATCTATAGCTGCAAAACT
CGTAGCCAATATGATTACAGAAGCTGGTGCGAACCGTGTCCTTGTATGTGATCTTCATTCCAGTCAAGCCATGGGATACT
TTGACATCCCAGTAGATCATGTTTATGGTCAGCCTGTGATTCTTGATTACCTCGCCAGCAAGACAATATGTTCAGATGAC
TTGGTGGTGGTGTCTCCGGATGTTGGAGGTGTTGCCAGGGCACGTGCATTTGCCAAAAAGCTATCAGATGCACCACTAGC
AATTGTTGATAAAAGAAGGCACGGGCACAATGTAATGAATCTTATTGGAGATGTTAGAGGAAAAGTGGCTGTTATGATGG
ATGATATGATTGATACAGCTGGAACTATTGCCAAAGGAGCTGAGCTACTGCATCAAGAAGGAGCAAGAGAAGTCTATGCA
TGTTGTACACATGCTGTTTTTAGCCCGCCAGCCATTGAAAGGTTATCAAGTGGTTTGTTTCAAGAAGTAATAATCACAAA
CACTATACCTCTCAAGGAGGACAAGAGTTTCCCACAGCTGACTATCCTTTCGGTTGCTAACCTTTTAGGCGAGACAATCT
GGCGTGTTCATGATGATTGCTCAGTAAGTACTAAGTAG

Species Parental gene accession Homology type Retrogenes number
Brachypodium distachyon BRADI3G02680 ortholog_one2one 1 retrogene
retro_bdis_29,
Leersia perrieri LPERR02G02000 ortholog_one2one 1 retrogene
retro_lper_21,
Oryza brachyantha OB02G12100 ortholog_one2one 1 retrogene
retro_obra_24,
Oryza barthii OBART02G02200 ortholog_one2one 1 retrogene
retro_obar_2,
Oryza glumaepatula OGLUM02G02060 ortholog_one2one 1 retrogene
retro_oglu_34,
Oryza nivara ONIVA02G02120 ortholog_one2one 1 retrogene
retro_oniv_9,
Oryza rufipogon ORUFI02G02210 ortholog_one2one 1 retrogene
retro_oruf_33,
Oryza sativa japonica OS02G0127700 ortholog_one2one 1 retrogene
retro_osat_35,
Triticum aestivum Traes_6AS_88F0CBEC0 ortholog_one2one 1 retrogene
retro_taes_35,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_opun_20 81.11 82.60
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Download FASTA sequences of all OPUNC02G01640 retrocopies