Parental gene:

OS06G0636600

Aliases:None
Description:None
Organism:Rice subsp. japonica (Oryza sativa japonica)
Coordinates:6:25867746..25870244(+)


>OS06G0636600
ATGCTTTCTTGCTTCCGGCTGCCGCGGCCGCCGGGCGGGGAGACGAACCAGGCGGCGGCGGCGTCGGCGTCGCCGAGGCG
GCCGTCGCTGCCGTTCGCGTCGAGCCTGTTCGCGGGGTCGCCGTCGACGTCGGGGAAGCAGCCGTGGCTGGCGGACGCGG
ACGACATGGAGAAGAAGCGGTGGGACAGCATGGAGTCGTGGTCGATGCTGCTGGACACGGCCATGGGGCCCTCCGGCGAG
CCGACGTCGAGCCGCGACAGCGGGCGGCGGGAGGAGTGGATGGCCGACCTCTCCCACCTCTTCATCGGCAACAAGTTCGC
CTCCGGCGCCAACAGCCGCATCTACCGCGGCATCTACAAGCAGCGCGCCGTCGCCGTCAAGATGGTCCGCATCCCCGAGC
GCGACGAGGCCCGCCGCGCCGTCCTCGAGGACCAGTTCAACTCCGAGGTCGCCTTCCTCTCCCGCCTCTACCACCCCAAC
ATCGTCCAGTTCATCGCGGCGTGCAAGAAGCCGCCGGTGTACTGCATCATCACGGAGTACATGTCGCAGGGGACGCTGAG
GATGTACCTGAACAAGAAGGACCCATACTCGCTGTCGTCGGAGACGATACTGAAGCTGGCGCTGGACATCTCGCGGGGGA
TGGAGTACCTGCACGCGCAGGGGGTGATCCACCGGGACCTCAAGTCGCAGAACCTCCTCCTCAACGACGAGATGCGCGTC
AAGGTCGCCGACTTCGGCACGTCCTGCCTGGAGACGGCGTGCCAGGCCACCAAGGGCAACAAGGGCACCTACCGATGGAT
GGCGCCGGAGATGACCAAGGAGAAGCCCTACACCCGCAAGGTCGACGTCTACAGCTTCGGCATCGTCCTCTGGGAGCTCA
CCACCTGCCTCCTCCCCTTCCAGGGCATGACCCCCGTCCAAGCCGCCTACGCCGCCTCCGAGAAGAATCTGCGGCCGCCG
TTGTCGACCTCGTGCTCTCCGGTGCTGAACAACCTGATCAAGAGGTGCTGGTCGGCGAACCCGGCGAGGCGGCCGGAGTT
CAGCTACATCGTGTCGGTGCTGGAGAAGTACGACCACTGCGTGAAGGAAGGGATGCCGATCATGGCGCACCAGGAGCTCA
GGATCTGGAGCTCCTTCGCCAAGATCTTCAGGATGGGCTGCATCACCAACAACTTGTCCATACCGGTGCATGCTTGA

Species Parental gene accession Homology type Retrogenes number
Oryza sativa indica BGIOSGA023324 ortholog_one2one 1 retrogene
retro_oind_40,
Oryza glumaepatula OGLUM06G23210 ortholog_one2one 1 retrogene
retro_oglu_33,
Oryza meridionalis OMERI06G22050 ortholog_one2one 1 retrogene
retro_omer_20,
Oryza nivara ONIVA06G26030 ortholog_one2one 1 retrogene
retro_oniv_29,
Oryza glaberrima ORGLA06G0183600 ortholog_one2one 1 retrogene
retro_ogla_6,
Oryza rufipogon ORUFI06G23740 ortholog_one2one 1 retrogene
retro_oruf_15,
Oryza sativa japonica OS03G0638800 within_species_paralog 2 retrogenes
retro_osat_62, retro_osat_81,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_osat_5 56.33 73.87
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Download FASTA sequences of all OS06G0636600 retrocopies