Parental gene:

POPTRDRAFT_582957, POPTR_0018s06860

Aliases:None
Description:Predicted protein [Source:UniProtKB/TrEMBL;Acc:B9N5G9]
Organism:Western balsam poplar (Populus trichocarpa)
Coordinates:18:6946883..6950650(+)


>POPTR_0018s06860
ATGGAAAATCTTGTTGTTTGTAATAATTGTCCAGTGGTAGTAAAAAATTCATTAATCTCAAAAAAGCCCCCCTCTTCACC
TAAATCTCCTCTTCGCCATCTACGCTCCTTCTCATCCTTGTTCAATCGCAGCGTGACATTAAGGATGGCTCTCCCTCCCT
CTGGCCAAAACCCAGTTGTTGAGCAGCAGAAAGTGATCATATCAAACAAACATGGTGAAAAACTGGTGGGCTTATTACAT
GACACTGGATCCAACGAGATTGTTATATTGTGTCATGGTTTTCGTTCCACAAAGGGAAACGATACTATGGTGAATCTTGC
CAAGGCATTAGAAAAGGAAGGAACCTCTTCCTTCCGCTTCGACTTTGCTGGAAACGGGGAAAGTGAAGGTTCATTTGCGT
ATGGTAGTTATTGGAGAGAGGCTGATGATTTACGTTCTGTAATGGAACACTTCCGTGGAGCAAGCCGTGCCATAAGTGCA
ATTCTTGGGCACAGTAAAGGAGGCGATGTGGTGCTCCTATATGCTTCCAAATATCAGGATATCACTACAGTATTCAATGT
TTCTGGCCGTTATGATCTGAAGAGAGGCATTGAAGAACGGATCGGAAAAGACTTTATGGAAAAGATCAAACAAGATGGAT
TCATCAATGTTAAGAATAGAACAGGAAGTGTTATTTATCGTGTGACTGAGGAAAGTTTGATGGATCGCCTGAATACTGAT
ATTCATAAAGCATGCCTTGTAATCAATAAGGAATGCAGGGTCTTCACTATTCATGGATCTGCTGATGAAATCATCCCAGT
GGAGGACGCATTAGAGTTTGCCAAGATCATACCAAATCACAGTCTACACATCATAGAAGGAGCAAATCATAGCTACACTT
CACATCAAACTGAATTAGCAGCTGTTGTTTTGAAGTTAATGAAGGCAACCTTACAGCAGGACTAA

Species Parental gene accession Homology type Retrogenes number
Arabidopsis thaliana AT3G47590 ortholog_many2many 1 retrogene
retro_atha_5,
Oryza sativa indica BGIOSGA001352 ortholog_many2many 1 retrogene
retro_oind_81,
Brassica oleracea Bo3g134660 ortholog_many2many 1 retrogene
retro_bole_24,
Brassica rapa Bra019508 ortholog_many2many 1 retrogene
retro_brap_47,
Hordeum vulgare MLOC_20645 ortholog_many2many 1 retrogene
retro_hvul_20,
Oryza sativa japonica OS01G0579900 ortholog_many2many 1 retrogene
retro_osat_70,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptri_17 86.52 84.39
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all POPTR_0018s06860 retrocopies