RetrogeneDB ID: | retro_dord_371 | ||
Retrocopylocation | Organism: | Kangaroo rat (Dipodomys ordii) | |
Coordinates: | scaffold_1461:30769..31163(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | Rpl32 | ||
Ensembl ID: | ENSDORG00000008426 | ||
Aliases: | None | ||
Description: | ribosomal protein L32 [Source:MGI Symbol;Acc:MGI:98038] |
Percent Identity: | 79.26 % |
Parental protein coverage: | 98.52 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | ALRPLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRR-RFKGQILMPNIGYG-SNKKTKHML |
ALRPLVKPK.VKK.TKKFIR.QS.RYVKI...W..PRGID.RV.R.RF.GQILM.NIG.G.SNKKTKH.L | |
Retrocopy | ALRPLVKPKSVKKSTKKFIRQQSNRYVKIPHSWQNPRGIDKRVWR<RFEGQILMSNIGIG<SNKKTKHLL |
Parental | PSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNPNARLRSEENE |
PSGFR.FL.HN.KELE.LLMCNKSYCAEIAH.VS.KNRKAIVE.AA.LAIR.T.P.ARLRSEENE | |
Retrocopy | PSGFRRFLIHNIKELEALLMCNKSYCAEIAH-VSCKNRKAIVESAAPLAIRITSPKARLRSEENE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |