Parental gene:

Rpl32, ENSMUSG00000057841

Aliases:Rpl32, AU020185, rpL32-3A
Description:ribosomal protein L32 [Source:MGI Symbol;Acc:MGI:98038]
Organism:Mouse (Mus musculus)
Coordinates:6:115805504..115808747(-)


>ENSMUSG00000057841
ATGGCTGCCCTCCGGCCTCTGGTGAAGCCCAAGATCGTCAAAAAGAGGACCAAGAAGTTCATCAGGCACCAGTCAGACCG
ATATGTGAAAATTAAGCGAAACTGGCGGAAACCCAGAGGCATTGACAACAGGGTGCGGAGAAGGTTCAAGGGCCAGATCC
TGATGCCCAACATCGGTTATGGGAGCAACAAGAAAACCAAGCACATGCTGCCCAGCGGCTTCCGCAAGTTCCTGGTCCAC
AATGTCAAGGAGCTGGAGGTGCTGCTGATGTGCAACAAATCTTACTGTGCTGAGATTGCTCACAATGTGTCCTCTAAGAA
CCGAAAAGCCATTGTAGAAAGAGCAGCACAGCTGGCCATCAGAGTCACCAATCCCAACGCCAGGCTACGCAGCGAAGAAA
ATGAGTAG

Library Parental gene expression (RPM)
SRP007412_brain 66 .84 RPM
SRP007412_cerebellum 42 .08 RPM
SRP007412_heart 82 .62 RPM
SRP007412_kidney 85 .24 RPM
SRP007412_liver 93 .26 RPM
SRP007412_testis 100 .40 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000014763 ortholog_one2many 3 retrogenes
retro_acar_104, retro_acar_125, retro_acar_67,
Ailuropoda melanoleuca ENSAMEG00000004583 possible_ortholog 26 retrogenes
retro_amel_1004, retro_amel_1041, retro_amel_1059, retro_amel_112, retro_amel_1274, retro_amel_1284, retro_amel_13, retro_amel_1394, retro_amel_1450, retro_amel_150, retro_amel_1651, retro_amel_168, retro_amel_1766, retro_amel_1827, retro_amel_1897, retro_amel_274, retro_amel_275, retro_amel_44, retro_amel_573, retro_amel_658, retro_amel_71, retro_amel_776, retro_amel_781, retro_amel_871, retro_amel_892, retro_amel_923,
Bos taurus ENSBTAG00000015283 possible_ortholog 10 retrogenes
retro_btau_1102, retro_btau_1391, retro_btau_1568, retro_btau_1645, retro_btau_1728, retro_btau_1764, retro_btau_377, retro_btau_623, retro_btau_631, retro_btau_654,
Choloepus hoffmanni ENSCHOG00000013534 possible_ortholog 27 retrogenes
retro_chof_1131, retro_chof_1164, retro_chof_1181, retro_chof_1234, retro_chof_1461, retro_chof_152, retro_chof_1821, retro_chof_1957, retro_chof_2022, retro_chof_205, retro_chof_2090, retro_chof_2146, retro_chof_2242, retro_chof_2265, retro_chof_2301, retro_chof_2410, retro_chof_2509, retro_chof_2527, retro_chof_2606, retro_chof_276, retro_chof_286, retro_chof_313, retro_chof_554, retro_chof_585, retro_chof_607, retro_chof_758, retro_chof_913,
Dipodomys ordii ENSDORG00000008426 ortholog_one2one 6 retrogenes
retro_dord_175, retro_dord_251, retro_dord_371, retro_dord_458, retro_dord_522, retro_dord_664,
Equus caballus ENSECAG00000007201 possible_ortholog 4 retrogenes
retro_ecab_1115, retro_ecab_26, retro_ecab_369, retro_ecab_698,
Erinaceus europaeus ENSEEUG00000011609 ortholog_one2one 5 retrogenes
retro_eeur_161, retro_eeur_247, retro_eeur_300, retro_eeur_39, retro_eeur_576,
Homo sapiens ENSG00000144713 ortholog_one2one 20 retrogenes
retro_hsap_1013, retro_hsap_1115, retro_hsap_1547, retro_hsap_1789, retro_hsap_1956, retro_hsap_2618, retro_hsap_2821, retro_hsap_2891, retro_hsap_3024, retro_hsap_3450, retro_hsap_3536, retro_hsap_3582, retro_hsap_3726, retro_hsap_3805, retro_hsap_3936, retro_hsap_3982, retro_hsap_4008, retro_hsap_4155, retro_hsap_4677, retro_hsap_814,
Loxodonta africana ENSLAFG00000032737 ortholog_one2one 1 retrogene
retro_lafr_14,
Myotis lucifugus ENSMLUG00000022528 ortholog_one2one 6 retrogenes
retro_mluc_100, retro_mluc_1283, retro_mluc_173, retro_mluc_2224, retro_mluc_2256, retro_mluc_48,
Rattus norvegicus ENSRNOG00000010746 ortholog_one2one 4 retrogenes
retro_rnor_179, retro_rnor_27, retro_rnor_278, retro_rnor_327,
Sarcophilus harrisii ENSSHAG00000012782 ortholog_one2many 1 retrogene
retro_shar_580,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_385 62.70 92.59
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2. retro_mmus_442 83.21 100.00
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3. retro_mmus_496 90.37 100.00
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4. retro_mmus_533 94.07 100.00
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5. retro_mmus_985 84.43 89.63
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6. retro_mmus_1132 77.94 100.00
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7. retro_mmus_1142 90.58 100.00
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8. retro_mmus_1746 73.28 96.30
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9. retro_mmus_2010 85.07 99.26
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10. retro_mmus_2263 93.33 100.00
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11. retro_mmus_2316 89.78 100.00
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12. retro_mmus_2341 59.63 80.00
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13. retro_mmus_2699 51.16 62.22
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14. retro_mmus_3099 91.85 100.00
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15. retro_mmus_3378 71.19 85.93
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16. retro_mmus_3605 91.85 100.00
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Download FASTA sequences of all ENSMUSG00000057841 retrocopies