RetrogeneDB ID: | retro_etel_1008 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_199856:5598..6032(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | UBE2N | ||
Ensembl ID: | ENSETEG00000001882 | ||
Aliases: | None | ||
Description: | ubiquitin-conjugating enzyme E2N [Source:HGNC Symbol;Acc:12492] |
Percent Identity: | 85.62 % |
Parental protein coverage: | 95.39 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | IIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYH |
.IKETQ.LLAEPVPGIKAEPDESNAR.FHVVIAGPQDSP.EGG..KLELFLPEEYPMA.PKVRFMTK.YH | |
Retrocopy | LIKETQHLLAEPVPGIKAEPDESNAR*FHVVIAGPQDSPSEGGSLKLELFLPEEYPMATPKVRFMTKMYH |
Parental | PNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQ-AIETARAWTRL |
PNVDKLGRI.LDI.KDKWSPALQIR.VLL.IQAL.S.P.PDDPLAND.AEQWKTNEAQ.AI.TARA.TRL | |
Retrocopy | PNVDKLGRIRLDISKDKWSPALQIRKVLLLIQAL*SSPYPDDPLANDEAEQWKTNEAQ<AIKTARARTRL |
Parental | YAMNNI |
YA.N.I | |
Retrocopy | YAKNHI |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |