RetrogeneDB ID: | retro_tbel_849 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_3150:128596..128975(-) | ||
Located in intron of: | ENSTBEG00000017669 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSTBEG00000012497 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 83.08 % |
Parental protein coverage: | 90.14 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | AEPDESNA-RYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKD |
AEPDESNA..YFHVV.AGPQDSPFEGGTFKL.LFLPEEYPMA.....F.TKIYHPNVD.LGRICLDILK. | |
Retrocopy | AEPDESNA<HYFHVVTAGPQDSPFEGGTFKL*LFLPEEYPMATSTIHFLTKIYHPNVDQLGRICLDILKA |
Parental | K-WSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQAIETARAWTRLYAMNNI |
..WSPAL.IRT..LSIQA.LSAPNPDDPLAND.AEQWKTN.AQAIETARAWTRLY.M.NI | |
Retrocopy | S<WSPALRIRTI-LSIQAWLSAPNPDDPLANDAAEQWKTNNAQAIETARAWTRLYTMDNI |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |