RetrogeneDB ID: | retro_etel_1661 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_28635:15..471(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | UBE2N | ||
Ensembl ID: | ENSETEG00000001882 | ||
Aliases: | None | ||
Description: | ubiquitin-conjugating enzyme E2N [Source:HGNC Symbol;Acc:12492] |
Percent Identity: | 88.16 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MAGLPRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVR |
MA.LP.RIIKETQ.LLAEPVPG.KAEPDESN.RYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPK.R | |
Retrocopy | MARLPCRIIKETQHLLAEPVPGFKAEPDESNTRYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKTR |
Parental | FMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQAIETA |
FMTKIYH..VDKLGR.CLDI.KDKWSPALQI.TVLLSIQALLSAPNPDDPLANDVAEQ.KTNE.QAIETA | |
Retrocopy | FMTKIYHTKVDKLGRMCLDIVKDKWSPALQIHTVLLSIQALLSAPNPDDPLANDVAEQRKTNEVQAIETA |
Parental | RAWTRLYAMNNI |
.AWTRLY..N.. | |
Retrocopy | GAWTRLYCRNHM |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |