RetrogeneDB ID: | retro_etel_1453 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_268655:6448..6746(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL27 | ||
Ensembl ID: | ENSETEG00000002811 | ||
Aliases: | None | ||
Description: | ribosomal protein L27 [Source:HGNC Symbol;Acc:10328] |
Percent Identity: | 65.69 % |
Parental protein coverage: | 72.79 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | DRPYSHALVAGIDRYPRKVTAAMGKK-KIAKRSKIKSFVKVYNYNHL-MPTRYSVDIPLDKTVVNKDVFR |
DR..S.ALV.GIDRYP..V.A...KK.K.A.RSK..S..KVYN.NHL.MPTR..VDIP.DKTV..K.V.R | |
Retrocopy | DRLDSQALVPGIDRYPHNVAAPTSKKGKVAQRSKTTSLMKVYNSNHL<MPTRHFVDIPSDKTVIDKEVVR |
Parental | DPALKRKA-RREAKVKFEERYKTGKNKWFFQK |
DPALK..A.R.EA.VK.E.RYK.GKNK.FFQK | |
Retrocopy | DPALKHEA<RQEAEVKCEKRYKRGKNKVFFQK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |