Parental gene:

RPL27, ENSBTAG00000017441

Aliases:None
Description:60S ribosomal protein L27 [Source:UniProtKB/Swiss-Prot;Acc:P61356]
Organism:Cow (Bos taurus)
Coordinates:19:43669373..43671655(+)


>ENSBTAG00000017441
ATGGGCAAGTTCATGAAACCCGGGAAGGTGGTGCTGGTCCTGGCCGGTCGCTACTCCGGACGCAAAGCGGTCATCGTGAA
GAACATTGATGACGGCACCTCAGACCGACCCTACAGCCACGCTCTGGTTGCTGGAATTGATCGCTATCCCCGCAAAGTGA
CAGCTGCCATGGGCAAGAAGAAAATTGCCAAGAGGTCAAAGATCAAGTCTTTTGTGAAAGTTTATAATTATAATCACCTC
ATGCCCACAAGGTACTCTGTGGATATCCCCTTGGACAAAACTGTTGTCAACAAGGATGTCTTCAGAGACCCTGCTCTCAA
ACGCAAGGCCCGACGAGAGGCAAAGGTCAAGTTTGAGGAGAGATACAAGACGGGCAAGAACAAATGGTTCTTCCAGAAGC
TGCGGTTTTAG

Library Parental gene expression (RPM)
SRP017611_brain 51 .53 RPM
SRP017611_kidney 131 .46 RPM
SRP017611_liver 83 .74 RPM
ERP005899_muscle 629 .99 RPM
ERP005899_liver 120 .33 RPM
SRP030211_testis 50 .49 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000000200 ortholog_many2many 3 retrogenes
Canis familiaris ENSCAFG00000014630 ortholog_many2many 6 retrogenes
Callithrix jacchus ENSCJAG00000013067 possible_ortholog 9 retrogenes
Cavia porcellus ENSCPOG00000027359 possible_ortholog 3 retrogenes
Dipodomys ordii ENSDORG00000010907 possible_ortholog 6 retrogenes
Equus caballus ENSECAG00000007500 ortholog_one2many 1 retrogene
Echinops telfairi ENSETEG00000002811 possible_ortholog 23 retrogenes
Felis catus ENSFCAG00000013142 ortholog_many2many 6 retrogenes
Homo sapiens ENSG00000131469 possible_ortholog 6 retrogenes
Gorilla gorilla ENSGGOG00000026039 possible_ortholog 6 retrogenes
Loxodonta africana ENSLAFG00000014220 possible_ortholog 3 retrogenes
Microcebus murinus ENSMICG00000014214 possible_ortholog 5 retrogenes
Myotis lucifugus ENSMLUG00000004119 possible_ortholog 1 retrogene
Macaca mulatta ENSMMUG00000008090 possible_ortholog 7 retrogenes
Monodelphis domestica ENSMODG00000015128 ortholog_one2many 1 retrogene
Mustela putorius furo ENSMPUG00000009913 ortholog_one2many 11 retrogenes
Mus musculus ENSMUSG00000063316 possible_ortholog 2 retrogenes
Nomascus leucogenys ENSNLEG00000011901 possible_ortholog 2 retrogenes
Oryctolagus cuniculus ENSOCUG00000003872 possible_ortholog 1 retrogene
Otolemur garnettii ENSOGAG00000003940 possible_ortholog 14 retrogenes
Procavia capensis ENSPCAG00000013249 possible_ortholog 4 retrogenes
Pan troglodytes ENSPTRG00000009232 possible_ortholog 6 retrogenes
Pteropus vampyrus ENSPVAG00000008817 possible_ortholog 4 retrogenes
Rattus norvegicus ENSRNOG00000020674 possible_ortholog 8 retrogenes
Sorex araneus ENSSARG00000011131 ortholog_one2many 10 retrogenes
Sarcophilus harrisii ENSSHAG00000012042 ortholog_many2many 4 retrogenes
Sus scrofa ENSSSCG00000025507 ortholog_one2many 5 retrogenes
Ictidomys tridecemlineatus ENSSTOG00000020555 possible_ortholog 5 retrogenes
Tarsius syrichta ENSTSYG00000003167 possible_ortholog 12 retrogenes
Tursiops truncatus ENSTTRG00000011739 ortholog_one2one 2 retrogenes
Vicugna pacos ENSVPAG00000002574 ortholog_one2many 1 retrogene

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_129 72.44 93.38
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2. retro_btau_338 86.13 100.00
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3. retro_btau_394 66.91 100.00
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4. retro_btau_1113 92.65 100.00
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5. retro_btau_1565 56.59 94.12
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6. retro_btau_1855 54.65 62.50
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Download FASTA sequences of all ENSBTAG00000017441 retrocopies