RetrogeneDB ID: | retro_etel_459 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_7610:72398..72601(+) | ||
Located in intron of: | ENSETEG00000003137 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | MINOS1 | ||
Ensembl ID: | ENSETEG00000010942 | ||
Aliases: | None | ||
Description: | mitochondrial inner membrane organizing system 1 [Source:HGNC Symbol;Acc:32068] |
Percent Identity: | 72.22 % |
Parental protein coverage: | 88.46 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 3 |
Parental | WDRCLADAVVKIGTGFGLGII-FSLT-VFKRRMWPLAFGSGMGLGMAYSNCQHDFQA-PYLLHGKFVKLQ |
WD.CL...VVK.GTGFGLGI..F.LT..FKRRMWPLAFGSGMGLGM..SNCQHDFQA.PY.L.G..V..Q | |
Retrocopy | WDWCLTNVVVKLGTGFGLGIL<FFLT<LFKRRMWPLAFGSGMGLGMTLSNCQHDFQA>PY-LRGNYVE*Q |
Parental | EQ |
.Q | |
Retrocopy | WQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Callithrix jacchus | ENSCJAG00000006709 | 1 retrocopy | |
Echinops telfairi | ENSETEG00000010942 | 5 retrocopies | |
Homo sapiens | ENSG00000173436 | 3 retrocopies | |
Gallus gallus | ENSGALG00000004039 | 1 retrocopy | |
Gorilla gorilla | ENSGGOG00000007347 | 4 retrocopies | |
Macaca mulatta | ENSMMUG00000005855 | 2 retrocopies | |
Mus musculus | ENSMUSG00000050608 | 1 retrocopy | |
Nomascus leucogenys | ENSNLEG00000007867 | 2 retrocopies | |
Pongo abelii | ENSPPYG00000001788 | 3 retrocopies | |
Pan troglodytes | ENSPTRG00000000269 | 2 retrocopies | |
Rattus norvegicus | ENSRNOG00000042696 | 2 retrocopies | |
Tarsius syrichta | ENSTSYG00000002903 | 1 retrocopy |