RetrogeneDB ID: | retro_etel_772 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_162313:3953..4248(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSETEG00000014128 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000000263 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 81.19 % |
Parental protein coverage: | 79.2 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | ASEVRVNPVEFNPDFVAR-MIPKVEWSALLEAAETLHLTEVPSAPA-EGYERDEEFLRKMHHVLLEVDVL |
ASEVR.NPVEFN.D...R.MIPKVEWSALL.AAET.HLTEVPSAP..EGY.RD.E.LRKMHHVLLEVDVL | |
Retrocopy | ASEVRINPVEFNHDSRDR<MIPKVEWSALLGAAETSHLTEVPSAPG<EGYGRDAECLRKMHHVLLEVDVL |
Parental | EGTLQCPESGRLFPISRGIPNKDRNDEETET |
EGTLQC.ESGRLFPI.RG.PN...NDEETET | |
Retrocopy | EGTLQCSESGRLFPIRRGTPNMLLNDEETET |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Ailuropoda melanoleuca | ENSAMEG00000017965 | 3 retrocopies | |
Bos taurus | ENSBTAG00000008646 | 1 retrocopy | |
Callithrix jacchus | ENSCJAG00000018026 | 1 retrocopy | |
Dasypus novemcinctus | ENSDNOG00000004644 | 1 retrocopy | |
Equus caballus | ENSECAG00000016960 | 1 retrocopy | |
Echinops telfairi | ENSETEG00000000263 | 4 retrocopies | |
Homo sapiens | ENSG00000173113 | 4 retrocopies | |
Gorilla gorilla | ENSGGOG00000001334 | 3 retrocopies | |
Macaca mulatta | ENSMMUG00000019647 | 2 retrocopies | |
Ochotona princeps | ENSOPRG00000004130 | 2 retrocopies | |
Ictidomys tridecemlineatus | ENSSTOG00000019857 | 1 retrocopy |