RetrogeneDB ID: | retro_meug_1726 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold54992:7120..7756(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PRELID1 | ||
Ensembl ID: | ENSMEUG00000001738 | ||
Aliases: | None | ||
Description: | PRELI domain containing 1 [Source:HGNC Symbol;Acc:30255] |
Percent Identity: | 66.51 % |
Parental protein coverage: | 98.61 % |
Number of stop codons detected: | 7 |
Number of frameshifts detected | 2 |
Parental | MVKYFLGQSVLRSSWDQVFAAFWQRYPNPYSKHVLTEDIVHREVTPDQKLLSRRLLTKTNRMPRWAERFF |
MVK.F.....L.SSWDQVF.AF.Q.Y.NP.SKHVL.E.IVH.....DQKLLSR..LTKTNRM.RW...F. | |
Retrocopy | MVKFFPQHIILVSSWDQVFGAFRQHYSNP*SKHVLSEYIVHCVGNTDQKLLSRQVLTKTNRMARWTRHFI |
Parental | PANV-AHSVYILEDSIVDPQ-NQTMTTFTWNINHARLMVVEERCVYCVNPENSGWTEIRREAWVSSSLFG |
PAN.....V.IL..SI.DPQ.NQ.MTTFTWNINHA...V..ERC..CVNPEN.G...I...A.VSSSLFG | |
Retrocopy | PANL<IPMVHILKGSILDPQ>NQIMTTFTWNINHA*SIVLKERCIFCVNPENRG*IGI*Q*A*VSSSLFG |
Parental | VSRAVQEFGLARFKSNVTKTIKGFEYILAKLQGEAPSKTLVETAKEATEKAKETALAATEKAKDLASKAA |
.SRAV.EF.LA.FKSN.......FEYIL.KL.GEAP.K.LVE.AKEATEKAKETAL.ATEKAK.LAS.AA | |
Retrocopy | MSRAV*EFHLASFKSN-DQLHERFEYILTKLKGEAPFKMLVEIAKEATEKAKETALEATEKAKELASQAA |
Parental | TKKQQ |
TK.QQ | |
Retrocopy | TKNQQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |