RetrogeneDB ID: | retro_meug_2054 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold84470:8780..9427(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PRELID1 | ||
Ensembl ID: | ENSMEUG00000001738 | ||
Aliases: | None | ||
Description: | PRELI domain containing 1 [Source:HGNC Symbol;Acc:30255] |
Percent Identity: | 73.52 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 3 |
Parental | MVKYFLGQSVLRSSWDQVFAAFWQRYPNPY-SKHVLTEDIVHREVTPDQKLLSRRLLTKTNRMPRWAERF |
MVKYFL.Q.V..SSWDQV.AA.W..YPN...SKHVLTEDIVH...TPDQKLLS..LL.KTNRMP.W.E.F | |
Retrocopy | MVKYFLEQNVFQSSWDQVIAACWKCYPNVV<SKHVLTEDIVHWKITPDQKLLS**LLRKTNRMPCWTEHF |
Parental | FPANVAHSVYILEDSIVDPQNQTMTTFTWNINHARLMVVEERCVYCVNPENSGWTEIRREAWVSSSLFGV |
F...VAHSVYILEDSIVD.QNQTMTTFTWNIN...LMV...RCVY.VN.ENS..TEI..E.W..SSLFGV | |
Retrocopy | FLTKVAHSVYILEDSIVDAQNQTMTTFTWNINNTQLMVEDKRCVYLVNSENSVRTEI*WETWIPSSLFGV |
Parental | SRAVQEFGLARFKSNVTKTIKGFEYILAKLQGEAPSKT-LVETAKEATEKAKETALAAT-EKAKDLASKA |
SR.V.EFGLARFK.NVTKTIKGFEYILA.LQ.EA.S.T...E..KEATEKAKETAL.AT...AKDLASK. | |
Retrocopy | SRTVPEFGLARFKINVTKTIKGFEYILANLQSEAFSNT>FFEITKEATEKAKETALPAT<QEAKDLASKV |
Parental | ATKKQQQQQ |
.TKKQ.QQQ | |
Retrocopy | GTKKQKQQQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |