RetrogeneDB ID: | retro_meug_2071 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold87218:8008..8521(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | TIMM17B | ||
Ensembl ID: | ENSMEUG00000004174 | ||
Aliases: | None | ||
Description: | translocase of inner mitochondrial membrane 17 homolog B (yeast) [Source:HGNC Symbol;Acc:17310] |
Percent Identity: | 73.99 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MEEYAREPCPWRIVDDCGGAFTMGVIGGGVFQTIKGFRNAPVGIQHRLRGSVSAVRIRAPQIGGSFAVWG |
.EEYA.EPCPWRIVDDCGGAFTM..IGGG.FQ.IKGFRN.PVG..HRLRGS..A...RAPQ.GGSFAVWG | |
Retrocopy | LEEYALEPCPWRIVDDCGGAFTMDTIGGGIFQAIKGFRNSPVGVSHRLRGSLTAIKTRAPQLGGSFAVWG |
Parental | GLFSTIDCGLVRLRGKEDPWNSITSGALTGAVLAARSGPLAMVGSAMMGGILLALIEGVGILLTRYTAQQ |
GLFS.IDC..V..RGKEDPWNSITSGALTGA.LAAR.GP.AMVGSA.MGGILLALIEG.GILLTR....Q | |
Retrocopy | GLFSMIDCSMVKVRGKEDPWNSITSGALTGAILAARNGPVAMVGSAEMGGILLALIEGAGILLTRFASSQ |
Parental | FRNTPPFLEDPGQLPPKEGSTPPPGYPGYGQYQ |
F.N.P.F.EDP.QLPP.....PP.....Y.QYQ | |
Retrocopy | FPNGPQFVEDPSQLPPAQ--LPPSPFGDYRQYQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Ailuropoda melanoleuca | ENSAMEG00000012474 | 1 retrocopy | |
Bos taurus | ENSBTAG00000018496 | 4 retrocopies | |
Cavia porcellus | ENSCPOG00000008768 | 2 retrocopies | |
Dasypus novemcinctus | ENSDNOG00000025897 | 2 retrocopies | |
Felis catus | ENSFCAG00000002569 | 2 retrocopies | |
Gorilla gorilla | ENSGGOG00000011427 | 1 retrocopy | |
Macropus eugenii | ENSMEUG00000004174 | 1 retrocopy |
retro_meug_2071 ,
|
Microcebus murinus | ENSMICG00000005971 | 3 retrocopies | |
Myotis lucifugus | ENSMLUG00000009148 | 1 retrocopy | |
Macaca mulatta | ENSMMUG00000004547 | 1 retrocopy | |
Mustela putorius furo | ENSMPUG00000013675 | 1 retrocopy | |
Mus musculus | ENSMUSG00000031158 | 1 retrocopy | |
Nomascus leucogenys | ENSNLEG00000007902 | 1 retrocopy | |
Oryctolagus cuniculus | ENSOCUG00000027418 | 2 retrocopies | |
Pteropus vampyrus | ENSPVAG00000007643 | 1 retrocopy | |
Ictidomys tridecemlineatus | ENSSTOG00000014173 | 1 retrocopy | |
Tarsius syrichta | ENSTSYG00000010396 | 2 retrocopies | |
Vicugna pacos | ENSVPAG00000009578 | 1 retrocopy |