RetrogeneDB ID: | retro_nleu_601 | ||
Retrocopylocation | Organism: | Gibbon (Nomascus leucogenys) | |
Coordinates: | GL397268.1:1672035..1672750(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | HNRNPA1 | ||
Ensembl ID: | ENSNLEG00000017659 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 86.67 % |
Parental protein coverage: | 64.25 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAM |
KSESPKEPEQ.RKLFIGG.SFETTDESLRSHFEQW.TLTDCVVMRD.NTKRSRGFGFVTYATVEEVDAAM | |
Retrocopy | KSESPKEPEQVRKLFIGGMSFETTDESLRSHFEQWETLTDCVVMRDSNTKRSRGFGFVTYATVEEVDAAM |
Parental | NARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGS |
NARPHK.DGRVVEPKRA.SR.DSQR.GAHLTV.KIF.GGI.E..EEHHLRDYFEQ..KIEVIEIMTD.G. | |
Retrocopy | NARPHKMDGRVVEPKRAISRGDSQRAGAHLTVEKIFAGGITE-AEEHHLRDYFEQHRKIEVIEIMTDQGN |
Parental | GKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEMA-SASSSQRGRSGSGNFGGGRGGGFG |
.KKR.F.FVT.DDHDSVDK.VIQKYHTVNGHN.EVRKALSKQEMA.SASSSQ.G.SGSGNFG.GRG.GF. | |
Retrocopy | SKKRDFDFVTIDDHDSVDKTVIQKYHTVNGHNGEVRKALSKQEMA>SASSSQKGQSGSGNFGCGRGVGFC |
Parental | GNDNFGRGGNFSGRGGFGGSRGGGGYGGSG |
GNDNFG.GGNFSGRGGFGGS.GGGGYGG.G | |
Retrocopy | GNDNFGHGGNFSGRGGFGGSHGGGGYGGNG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |