RetrogeneDB ID: | retro_pcap_54 | ||
Retrocopylocation | Organism: | Hyrax (Procavia capensis) | |
Coordinates: | GeneScaffold_2832:64639..64858(-) | ||
Located in intron of: | ENSPCAG00000003946 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS11 | ||
Ensembl ID: | ENSPCAG00000004146 | ||
Aliases: | None | ||
Description: | ribosomal protein S11 [Source:HGNC Symbol;Acc:10384] |
Percent Identity: | 52.05 % |
Parental protein coverage: | 50.69 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | YYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKR |
YYKNI.LGFKTP.....GT.I.K.CPFT........I...VV...K.QR..VI.R.YLHY..K...FEK. | |
Retrocopy | YYKNISLGFKTPRRPFIGTGIAKMCPFTRIIYMQRHIVCSVVIHRKTQRITVIHRNYLHYVCKHDCFEKS |
Parental | HKN |
.KN | |
Retrocopy | RKN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |