RetrogeneDB ID: | retro_mputfur_200 | ||
Retrocopylocation | Organism: | Ferret (Mustela putorius furo) | |
Coordinates: | GL896898.1:12416308..12416739(+) | ||
Located in intron of: | ENSMPUG00000013168 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS11 | ||
Ensembl ID: | ENSMPUG00000002599 | ||
Aliases: | None | ||
Description: | ribosomal protein S11 [Source:HGNC Symbol;Acc:10384] |
Percent Identity: | 60.93 % |
Parental protein coverage: | 93.04 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 4 |
Parental | MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPK-EAIEGTYIDKKCPFTGNVSIR |
M...QTE.AYQKQ.TIF..KKR..LGETG.E.L.RY....GLGF.T...EA.E.TY.DKKCPF.G.VSI. | |
Retrocopy | MMAMQTEHAYQKQLTIFE-KKRGPLGETGEEDL-RYFNHMGLGFRTHR<EATESTYVDKKCPFPGHVSIG |
Parental | GRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSP-CFRDV-QIGDIVTV-GECRPLSK |
..ILS.VVTKM.MQ.T.V..RDYL..I.KY.RFEK...NM.V...P.CF.DV.QI.DIVTV.G.C.PL.. | |
Retrocopy | EQILSDVVTKMRMQKTTVTYRDYLPSI*KYSRFEKCRQNMHVPRPP<CFWDV<QISDIVTV<GQCQPLCN |
Parental | TVRFNVLKVTK |
.V.F...KVTK | |
Retrocopy | SVCFHTHKVTK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |