RetrogeneDB ID: | retro_shar_714 | ||
Retrocopylocation | Organism: | Tasmanian devil (Sarcophilus harrisii) | |
Coordinates: | GL861589.1:675763..676039(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | UBE2D1 | ||
Ensembl ID: | ENSSHAG00000010481 | ||
Aliases: | None | ||
Description: | ubiquitin-conjugating enzyme E2D 1 [Source:HGNC Symbol;Acc:12474] |
Percent Identity: | 85.87 % |
Parental protein coverage: | 62.59 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | AGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINSNGSICLDILRSQ |
AG.VGDD.FHWQ.TIMGPPDSAYQGG...LTV.FPTDY.FKPPKIAFT.KIYHPNIN.NGSICLDILRSQ | |
Retrocopy | AGAVGDDRFHWQVTIMGPPDSAYQGGXXXLTVNFPTDYAFKPPKIAFTEKIYHPNINNNGSICLDILRSQ |
Parental | WSPALTVSKVLLSICSLLCDPN |
WS.A.TVSKVLLSI.SLLCDPN | |
Retrocopy | WSVAVTVSKVLLSIGSLLCDPN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |