RetrogeneDB ID: | retro_shar_75 | ||
Retrocopylocation | Organism: | Tasmanian devil (Sarcophilus harrisii) | |
Coordinates: | GL834477.1:940821..941334(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSSHAG00000011989 | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSSHAG00000002399 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 97.66 % |
Parental protein coverage: | 88.28 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | SELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVD |
.ELNKNPVEGFSAGLID.NDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPP.MKFITEIWHPNVD | |
Retrocopy | TELNKNPVEGFSAGLIDGNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPEMKFITEIWHPNVD |
Parental | KNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAA |
KNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAA | |
Retrocopy | KNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Bos taurus | ENSBTAG00000014433 | 1 retrocopy | |
Choloepus hoffmanni | ENSCHOG00000011801 | 1 retrocopy | |
Ciona savignyi | ENSCSAVG00000009498 | 1 retrocopy | |
Macropus eugenii | ENSMEUG00000009769 | 3 retrocopies | |
Myotis lucifugus | ENSMLUG00000002118 | 1 retrocopy | |
Oryctolagus cuniculus | ENSOCUG00000000248 | 1 retrocopy | |
Otolemur garnettii | ENSOGAG00000008795 | 1 retrocopy | |
Rattus norvegicus | ENSRNOG00000010041 | 3 retrocopies | |
Sarcophilus harrisii | ENSSHAG00000002399 | 1 retrocopy |
retro_shar_75 ,
|
Tupaia belangeri | ENSTBEG00000006117 | 1 retrocopy | |
Tetraodon nigroviridis | ENSTNIG00000008566 | 1 retrocopy | |
Takifugu rubripes | ENSTRUG00000005995 | 1 retrocopy | |
Tursiops truncatus | ENSTTRG00000000595 | 1 retrocopy | |
Drosophila melanogaster | FBgn0058045 | 1 retrocopy |