RetrogeneDB ID: | retro_tbel_2852 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_121095:53419..53697(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | UBE2G1 | ||
Ensembl ID: | ENSTBEG00000006117 | ||
Aliases: | None | ||
Description: | ubiquitin-conjugating enzyme E2G 1 [Source:HGNC Symbol;Acc:12482] |
Percent Identity: | 85.11 % |
Parental protein coverage: | 60.39 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | LNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKN |
LNKNPVEGFSAGLIDDND.YR.E.LIIGPPDTLYEG..F...LTFPKDYPL..PKMKFITEIWHPNVDKN | |
Retrocopy | LNKNPVEGFSAGLIDDNDIYR*EGLIIGPPDTLYEGSIF*TRLTFPKDYPLWLPKMKFITEIWHPNVDKN |
Parental | GDVCISILHEPGEDKYG-YEKPEE |
GDVCISI.HEPGEDKY..YEKPE. | |
Retrocopy | GDVCISIFHEPGEDKYS<YEKPED |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Bos taurus | ENSBTAG00000014433 | 1 retrocopy | |
Choloepus hoffmanni | ENSCHOG00000011801 | 1 retrocopy | |
Ciona savignyi | ENSCSAVG00000009498 | 1 retrocopy | |
Macropus eugenii | ENSMEUG00000009769 | 3 retrocopies | |
Myotis lucifugus | ENSMLUG00000002118 | 1 retrocopy | |
Oryctolagus cuniculus | ENSOCUG00000000248 | 1 retrocopy | |
Otolemur garnettii | ENSOGAG00000008795 | 1 retrocopy | |
Rattus norvegicus | ENSRNOG00000010041 | 3 retrocopies | |
Sarcophilus harrisii | ENSSHAG00000002399 | 1 retrocopy | |
Tupaia belangeri | ENSTBEG00000006117 | 1 retrocopy |
retro_tbel_2852 ,
|
Tetraodon nigroviridis | ENSTNIG00000008566 | 1 retrocopy | |
Takifugu rubripes | ENSTRUG00000005995 | 1 retrocopy | |
Tursiops truncatus | ENSTTRG00000000595 | 1 retrocopy | |
Drosophila melanogaster | FBgn0058045 | 1 retrocopy |