Parental gene:

ENSOCUG00000000248

Aliases:None
Description:None
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:19:14291994..14305076(+)


>ENSOCUG00000000248
TTAGAACTTAGAACATATGTGCTCAAATTCTGTAATTTGTTTGAACTCAACAAAAATCCAGTGGAAGGCTTTTCAGCAGG
TTTAATAGATGACAATGATCTCTACCGATGGGAAGTCCTTATTATTGGTCCTCCAGATACACTATATGAAGGTGGTGTTT
TTAAGGCTCACCTCACTTTTCCAAAGGATTATCCCCTCCGGCCTCCTAAAATGAAATTCATTACAGAAATCTGGCACCCA
AATGTTGATAAAAATGGTGATGTTTGCATTTCTATTCTTCATGAGCCTGGGGAAGATAAATATGGTTATGAAAAGCCAGA
GGAACGTTGGCTGCCTATCCATACTGTGGAAACCATCATGATAAGTGTCATTTCTATGCTGGCAGACCCTAATGGAGACT
CACCAGCTAATGTTGATGCCGCGAAAGAATGGAGGGAAGACAGAAATGGAGAATTTAAAAGGAAAGTTGCCCGCTGTGTA
AGAAAAAGCCAAGAGACTGCTTTCGAGTGA

Library Parental gene expression (RPM)
SRP017611_liver 6 .63 RPM
SRP017611_kidney 9 .22 RPM
SRP017611_brain 13 .36 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000014433 ortholog_one2many 1 retrogene
retro_btau_604,
Choloepus hoffmanni ENSCHOG00000011801 ortholog_one2many 1 retrogene
retro_chof_2181,
Ciona savignyi ENSCSAVG00000009498 ortholog_many2many 1 retrogene
retro_csav_4,
Macropus eugenii ENSMEUG00000009769 ortholog_one2many 3 retrogenes
retro_meug_360, retro_meug_473, retro_meug_647,
Myotis lucifugus ENSMLUG00000002118 ortholog_many2many 1 retrogene
retro_mluc_104,
Oryctolagus cuniculus ENSOCUG00000023588 within_species_paralog 3 retrogenes
retro_ocun_131, retro_ocun_1719, retro_ocun_1793,
Otolemur garnettii ENSOGAG00000008795 ortholog_one2many 1 retrogene
retro_ogar_2554,
Rattus norvegicus ENSRNOG00000010041 ortholog_many2many 3 retrogenes
retro_rnor_2496, retro_rnor_317, retro_rnor_970,
Sarcophilus harrisii ENSSHAG00000002399 possible_ortholog 1 retrogene
retro_shar_75,
Tupaia belangeri ENSTBEG00000006117 ortholog_one2many 1 retrogene
retro_tbel_2852,
Tetraodon nigroviridis ENSTNIG00000008566 possible_ortholog 1 retrogene
retro_tnig_11,
Takifugu rubripes ENSTRUG00000005995 possible_ortholog 1 retrogene
retro_trub_4,
Tursiops truncatus ENSTTRG00000000595 ortholog_one2many 1 retrogene
retro_ttru_1578,
Drosophila melanogaster FBgn0058045 ortholog_many2many 1 retrogene
retro_dmel_6,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_152 95.45 91.12
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Download FASTA sequences of all ENSOCUG00000000248 retrocopies