RetrogeneDB ID: | retro_meug_647 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold151791:4499..4796(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | UBE2G1 | ||
Ensembl ID: | ENSMEUG00000009769 | ||
Aliases: | None | ||
Description: | ubiquitin-conjugating enzyme E2G 1 [Source:HGNC Symbol;Acc:12482] |
Percent Identity: | 61.62 % |
Parental protein coverage: | 64.24 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | KMKFITEIWHPNVD-KGDVCISI-HEPGDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDA |
.......I.HPNVD..GDVCISI.H..G...GYEKPEE..L.IH.VETI.IS.IS.LA.P.GD.P..VD. | |
Retrocopy | QLSVLISICHPNVDTNGDVCISILHDLGMIHGYEKPEECLLSIHMVETIIISIISVLAHPSGDLPTKVDT |
Parental | AKEWREDRNGEFKRKVARCVRKSQETAFE |
AKEWRED.N..F.RKV...VRKSQE..FE | |
Retrocopy | AKEWRED*NEQFQRKVDHDVRKSQEIVFE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Bos taurus | ENSBTAG00000014433 | 1 retrocopy | |
Choloepus hoffmanni | ENSCHOG00000011801 | 1 retrocopy | |
Ciona savignyi | ENSCSAVG00000009498 | 1 retrocopy | |
Macropus eugenii | ENSMEUG00000000812 | 1 retrocopy | |
Macropus eugenii | ENSMEUG00000009769 | 3 retrocopies |
retro_meug_360, retro_meug_473, retro_meug_647 ,
|
Myotis lucifugus | ENSMLUG00000002118 | 1 retrocopy | |
Oryctolagus cuniculus | ENSOCUG00000000248 | 1 retrocopy | |
Otolemur garnettii | ENSOGAG00000008795 | 1 retrocopy | |
Rattus norvegicus | ENSRNOG00000010041 | 3 retrocopies | |
Sarcophilus harrisii | ENSSHAG00000002399 | 1 retrocopy | |
Tupaia belangeri | ENSTBEG00000006117 | 1 retrocopy | |
Tetraodon nigroviridis | ENSTNIG00000008566 | 1 retrocopy | |
Takifugu rubripes | ENSTRUG00000005995 | 1 retrocopy | |
Tursiops truncatus | ENSTTRG00000000595 | 1 retrocopy | |
Drosophila melanogaster | FBgn0058045 | 1 retrocopy |