RetrogeneDB ID: | retro_tbel_1521 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_4986:520829..521298(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | DNAJB7 | ||
Ensembl ID: | ENSTBEG00000009586 | ||
Aliases: | None | ||
Description: | DnaJ (Hsp40) homolog, subfamily B, member 7 [Source:HGNC Symbol;Acc:24986] |
Percent Identity: | 77.78 % |
Parental protein coverage: | 69.26 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | NMVDYYEVLGVQRHASPEDIK-KAYRKLALKWHPDKNPENKDEAERKFKQVAEAYEVLSDAKKRDIYD-R |
NMVDY.E.LGVQR.AS..D...KAYRK.ALKWHPDKNPEN..EAERKFKQV..A.E.LSDAKKRDIYD.R | |
Retrocopy | NMVDYCEGLGVQRRASRQDMR<KAYRKVALKWHPDKNPENEEEAERKFKQVTKALEALSDAKKRDIYD<R |
Parental | YGKEGLNGGGGGGSHFDGPFEYGFTFRNPDDVFREFFGGRDPFSFDFFEDPFEDFFGNRRGPRGSRSRGT |
.G.EGLNGGGGGGSHF.GPFEYGFTF.NPDDV.R.FFGGRDPFSFD.FEDPFEDFFGN.RGPRGSRSRGT | |
Retrocopy | FGEEGLNGGGGGGSHFAGPFEYGFTFPNPDDV-RGFFGGRDPFSFDSFEDPFEDFFGNGRGPRGSRSRGT |
Parental | ASFFSAFSGFPSFGSGFSSLDT |
..F.S..S.F.S...GF.SL.T | |
Retrocopy | --FPSFGSAFSSLDTGFTSLGT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |