RetrogeneDB ID: | retro_tbel_683 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_2738:159627..160094(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | C14orf166 | ||
Ensembl ID: | ENSTBEG00000013898 | ||
Aliases: | None | ||
Description: | chromosome 14 open reading frame 166 [Source:HGNC Symbol;Acc:23169] |
Percent Identity: | 79.25 % |
Parental protein coverage: | 63.93 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | YLKDVNCPFKIQD--RQEAIDWLLGLAVRLEYGDNAEKYKDLVPDNAK-NSDNATKNAEPLINLDVNNPD |
Y.KDVNCPFKI.D...QEAIDWL.GLAV.LE..DNAEKYKDLV.DNAK.NSDN.TKNAEPLINLD.NN.D | |
Retrocopy | YFKDVNCPFKILDWDPQEAIDWLCGLAVSLECEDNAEKYKDLVSDNAK<NSDNTTKNAEPLINLDMNNSD |
Parental | FKAGVMALANLLQIQRHDDYLVMLKAIRILAQGRLTQDAVAKANQLKEGLPVALDKHILGFDTGDAVLNE |
FK..VMALANL.....HDDYLVMLKAIRIL....LTQDAVAKANQ.KE.LPVALDKHILGFDTGDAVLNE | |
Retrocopy | FKFSVMALANL--DSGHDDYLVMLKAIRILVKECLTQDAVAKANQMKEDLPVALDKHILGFDTGDAVLNE |
Parental | AAQILRLLHIEELRELQTK |
AAQIL.LLH.EE.R.L..K | |
Retrocopy | AAQILQLLHPEEQRSLDLK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |