RetrogeneDB ID: | retro_tbel_880 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_3228:148442..148819(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | C14orf166 | ||
Ensembl ID: | ENSTBEG00000013898 | ||
Aliases: | None | ||
Description: | chromosome 14 open reading frame 166 [Source:HGNC Symbol;Acc:23169] |
Percent Identity: | 77.34 % |
Parental protein coverage: | 52.05 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | YLKDVNCPFKIQDRQEAIDWLLGLAVRLEYGDNAEKYKDLVPDNAKNSDNATKNAEPLINLDVNNPDFKA |
YLK....P.KIQD.QEAIDWLL.LAVR.EYGDN..KYKDL..DN.KNSDNA.KNAEPLINL..NNPDFK. | |
Retrocopy | YLKNDT*PCKIQDLQEAIDWLLSLAVRFEYGDNSKKYKDLAHDNVKNSDNAIKNAEPLINLYENNPDFKT |
Parental | GVMALANLLQIQRHDDYLVMLKAIRILAQGRLTQDAVAK-ANQLKEGLPVALDKHILG |
GVMAL.N.LQIQRHDDYL..LKAIRIL.Q..LT.DAVAK..NQ.KEGLPV.LDKHILG | |
Retrocopy | GVMALSN-LQIQRHDDYLAILKAIRILVQEHLTLDAVAK<RNQTKEGLPVTLDKHILG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |