RetrogeneDB ID: | retro_tsyr_763 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_19416:18087..18459(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | TPT1 | ||
Ensembl ID: | ENSTSYG00000003160 | ||
Aliases: | None | ||
Description: | tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:12022] |
Percent Identity: | 83.06 % |
Parental protein coverage: | 80. % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | MVSRTEGNIDDSLIGGNASAEGPEGEGTESTVVTGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLE |
MVSRTEGNI.DSL.GGNASAE.P.GEGTESTV.TGVDI.MNHH..E.SFTKEAYK.YIKDYM.S.KGKLE | |
Retrocopy | MVSRTEGNIADSLAGGNASAESPKGEGTESTVITGVDIGMNHHP*EASFTKEAYKLYIKDYMNSCKGKLE |
Parental | EQRPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTP |
EQRPE.VKPFMTG.AE.IKHILANFKNYQFFIGE.M.PD.M.ALLDY.EDG.TP | |
Retrocopy | EQRPE*VKPFMTGIAEEIKHILANFKNYQFFIGESMSPDDMFALLDYCEDGMTP |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |