RetrogeneDB ID: | retro_ttru_1699 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | scaffold_86333:62818..63265(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | CALM1 | ||
Ensembl ID: | ENSTTRG00000013584 | ||
Aliases: | None | ||
Description: | calmodulin 1 (phosphorylase kinase, delta) [Source:HGNC Symbol;Acc:1442] |
Percent Identity: | 86.58 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 0 |
Parental | MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL |
MA..LTEEQI.EFKEAFSLFDKDG.GTITTKEL.TVMRS.G.N.TEA.LQ.MINEVDADGNGTIDFPEFL | |
Retrocopy | MAE*LTEEQITEFKEAFSLFDKDGYGTITTKEL*TVMRSHG*NLTEADLQYMINEVDADGNGTIDFPEFL |
Parental | TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE |
TMMA.KMKD.DS.EEIREAF.V.DKDGN.YISAAELRHVMTNLGEKL..EEVDEMIREADIDGD.QVNYE | |
Retrocopy | TMMAIKMKDADS*EEIREAFHVSDKDGNIYISAAELRHVMTNLGEKLRGEEVDEMIREADIDGDNQVNYE |
Parental | EFVQMMTAK |
EFVQ.MTAK | |
Retrocopy | EFVQLMTAK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |