miRNEST 2.0, an integrative microRNA resource :: Browse :: Metazoa
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kingdom phylum subclass order family genus species
Below is a taxonomy, according to NCBI, of species belonging to kingdom Metazoa . (Go to Viridiplantae . )
The values next to species name mean a number of miRNAs identified by miRNEST pipeline.
You can access the miRNAs by clicking a species name.
Metazoa Arthropoda Ellipura Collembola Onychiuridae Onychiurus Onychiurus arcticus 2 Sarsostraca Anostraca Artemiidae Artemia Artemia franciscana 2 Eumalacostraca Amphipoda Gammaridae Gammarus Gammarus pulex 1 Decapoda Varunidae Eriocheir Eriocheir sinensis (Chinese mitten crab, Chinese hairy crab) 7 Penaeidae Penaeus Penaeus monodon (black tiger shrimp, giant tiger prawn, tiger prawn) 6 Litopenaeus Litopenaeus vannamei (Pacific white shrimp, white shrimp) 17 Fenneropenaeus Fenneropenaeus chinensis (fleshy prawn) 2 Nephropidae Homarus Homarus americanus (American lobster) 10 no_rank Petrolisthes Petrolisthes cinctipes (flat porcelain crab) 15 Portunidae Carcinus Carcinus maenas (green crab, common shore crab) 8 Callinectes Callinectes sapidus (blue crab) 3 Phyllopoda Diplostraca Daphniidae Daphnia Daphnia magna 2 Daphnia pulex (common water flea) 20 Copepoda Calanoida Calanidae Calanus Calanus finmarchicus 2 Siphonostomatoida Caligidae Caligus Caligus clemensi 5 Caligus rogercresseyi 4 Lepeophtheirus Lepeophtheirus salmonis (salmon louse) 15 Pennellidae Lernaeocera Lernaeocera branchialis 2 Neoptera Hemiptera Aphididae Aphis Aphis gossypii (cotton aphid, melon aphid) 22 Myzus Myzus persicae (green peach aphid, peach-potato aphid) 5 Acyrthosiphon Acyrthosiphon pisum (pea aphid) 15 Reduviidae Rhodnius Rhodnius prolixus 1 Delphacidae Peregrinus Peregrinus maidis (corn hopper) 5 Nilaparvata Nilaparvata lugens (brown planthopper) 10 Hymenoptera Apidae Bombus Bombus terrestris 1 Apis Apis mellifera (honey bee, bee, honeybee) 8 Formicidae Solenopsis Solenopsis invicta (red fire ant, imported red fire ant, red imported fire ant) 9 Pteromalidae Nasonia Nasonia vitripennis (jewel wasp) 6 Nasonia giraulti 1 Coleoptera Curculionidae Dendroctonus Dendroctonus ponderosae (mountain pine beetle) 3 Tenebrionidae Tribolium Tribolium castaneum (red flour beetle, rust-red flour beetle) 6 Thysanoptera Thripidae Frankliniella Frankliniella occidentalis (western flower thrips) 1 Lepidoptera Papilionidae Papilio Papilio xuthus 1 Noctuidae Spodoptera Spodoptera littoralis 3 Spodoptera frugiperda (fall armyworm) 5 Heliothis Heliothis virescens (tobacco budworm) 7 Trichoplusia Trichoplusia ni (cabbage looper) 1 Nymphalidae Bicyclus Bicyclus anynana (squinting bush brown) 6 Danaus Danaus plexippus (monarch butterfly, American monarch) 4 Tortricidae Epiphyas Epiphyas postvittana 2 Choristoneura Choristoneura fumiferana (spruce budworm) 7 Saturniidae Antheraea Antheraea assama (Indian muga silkmoth) 4 Bombycidae Bombyx Bombyx mori (domestic silkworm, silk moth, silkworm) 61 Crambidae Ostrinia Ostrinia nubilalis (European corn borer) 4 Orthoptera Acrididae Locusta Locusta migratoria (migratory locust) 3 Gryllidae Laupala Laupala kohalensis 4 Gryllus Gryllus bimaculatus (two-spotted cricket) 2 Diptera Calliphoridae Cochliomyia Cochliomyia hominivorax (primary screw-worm) 4 Drosophilidae Drosophila Drosophila pseudoobscura 5 Drosophila auraria 7 Drosophila grimshawi 3 Drosophila willistoni 16 Drosophila yakuba 2 Drosophila ananassae 2 Drosophila sechellia 6 Drosophila erecta 3 Drosophila virilis 7 Drosophila melanogaster (fruit fly) 29 Drosophila mojavensis 7 Drosophila simulans 3 Psychodidae Lutzomyia Lutzomyia longipalpis 9 Phlebotomus Phlebotomus papatasi 7 Diopsidae Teleopsis Teleopsis dalmanni 5 Tephritidae Ceratitis Ceratitis capitata (Mediterranean fruit fly) 15 Chironomidae Polypedilum Polypedilum vanderplanki (sleeping chironomid) 2 Culicidae Culex Culex quinquefasciatus (southern house mosquito) 9 Aedes Aedes aegypti (yellow fever mosquito) 10 Anopheles Anopheles gambiae (African malaria mosquito) 22 Anopheles stephensi (Asian malaria mosquito) 6 Acari Ixodida Ixodidae Ixodes Ixodes scapularis (black-legged tick, blacklegged tick, deer tick, shoulder tick) 16 Rhipicephalus Rhipicephalus appendiculatus 2 Rhipicephalus microplus (southern cattle tick, cattle tick) 4 Porifera Ceractinomorpha Haplosclerida Niphatidae Amphimedon Amphimedon queenslandica 11 Tetractinomorpha Hadromerida Suberitidae Suberites Suberites domuncula 2 Homoscleromorpha Homosclerophorida Plakinidae Oscarella Oscarella carmela 3 Onychophora no_rank no_rank Peripatopsidae Peripatopsis Peripatopsis sedgwicki 2 Annelida Hirudinea Rhynchobdellida Glossiphoniidae Helobdella Helobdella robusta 30 Oligochaeta Haplotaxida Tubificidae Tubifex Tubifex tubifex (sludge worm) 8 Lumbricidae Lumbricus Lumbricus rubellus (humus earthworm) 7 Polychaeta Terebellida Alvinellidae Alvinella Alvinella pompejana 27 Nematoda Chromadorea Spirurida Onchocercidae Brugia Brugia malayi (agent of lymphatic filariasis) 5 Onchocerca Onchocerca volvulus 2 Tylenchida Heteroderidae Heterodera Heterodera glycines (soybean cyst nematode) 1 Globodera Globodera rostochiensis 2 Meloidogynidae Meloidogyne Meloidogyne chitwoodi 2 Meloidogyne hapla 1 Meloidogyne incognita (southern root-knot nematode) 1 Rhabditida Strongyloididae Strongyloides Strongyloides stercoralis 1 Strongyloides ratti 1 Heligmonellidae Nippostrongylus Nippostrongylus brasiliensis 2 Rhabditidae Caenorhabditis Caenorhabditis brenneri 2 Caenorhabditis elegans (nematode) 15 Caenorhabditis japonica 2 Caenorhabditis remanei 1 Ancylostomatidae Ancylostoma Ancylostoma ceylanicum 1 Ancylostoma caninum (dog hookworm) 9 Heterorhabditidae Heterorhabditis Heterorhabditis bacteriophora 4 Ascaridida Ascarididae Ascaris Ascaris suum (pig roundworm) 4 Diplogasterida Neodiplogasteridae Pristionchus Pristionchus pacificus 6 Enoplia Trichocephalida Trichinellidae Trichinella Trichinella spiralis 6 Trichinella pseudospiralis 4 Chaetognatha no_rank Phragmophora Spadellidae Spadella Spadella cephaloptera 1 Mollusca Eogastropoda Docoglossa Lottiidae Lottia Lottia gigantea 9 Gastropoda Pulmonata Planorbidae Biomphalaria Biomphalaria glabrata (bloodfluke planorb) 11 Lymnaeidae Lymnaea Lymnaea stagnalis (great pond snail) 6 Coleoidea Sepiolida Sepiolidae Euprymna Euprymna scolopes 18 Pteriomorphia Ostreoida Ostreidae Crassostrea Crassostrea gigas (Pacific oyster) 12 Mytiloida Mytilidae Mytilus Mytilus californianus (California mussel) 10 Orthogastropoda Aplysiomorpha Aplysiidae Aplysia Aplysia californica (California sea hare) 43 Chordata Ascidiacea Enterogona Cionidae Ciona Ciona savignyi 2 Ciona intestinalis 74 Stolidobranchia Pyuridae Halocynthia Halocynthia roretzi 5 Molgulidae Molgula Molgula tectiformis 4 Actinopterygii Scorpaeniformes Sebastidae Sebastes Sebastes rastrelliger (grass rockfish) 7 Sebastes caurinus (copper rockfish) 9 Anoplopomatidae Anoplopoma Anoplopoma fimbria 11 Gadiformes Gadidae Gadus Gadus morhua (Atlantic cod) 49 Cypriniformes Cyprinidae Rutilus Rutilus rutilus (roach minnow) 6 Danio Danio rerio (zebrafish, leopard danio, zebra danio, zebra fish) 20 Pimephales Pimephales promelas (fathead minnow) 17 Cyprinus Cyprinus carpio (common carp, carp) 13 Cobitidae Misgurnus Misgurnus anguillicaudatus (oriental weatherfish, Japanese weatherfish, dojo loach, oriental weatherloach) 7 Siluriformes Ictaluridae Ictalurus Ictalurus punctatus (channel catfish) 50 Ictalurus furcatus (blue catfish) 19 Tetraodontiformes Tetraodontidae Takifugu Takifugu rubripes (torafugu, tiger puffer) 4 Perciformes Nototheniidae Dissostichus Dissostichus mawsoni (Antarctic toothfish) 10 Sparidae Sparus Sparus aurata (gilthead seabream, gilthead bream, silver seabream) 25 Cichlidae Paralabidochromis Paralabidochromis chilotes 4 Oreochromis Oreochromis niloticus (Nile tilapia) 26 Scombridae Thunnus Thunnus thynnus (northern bluefin tuna, bluefin tuna) 5 Latidae Lates Lates calcarifer (barramundi perch, barramundi) 2 Percidae Perca Perca flavescens (yellow perch) 3 Moronidae Dicentrarchus Dicentrarchus labrax (European seabass, European sea bass) 20 Osmeriformes Osmeridae Osmerus Osmerus mordax (rainbow smelt) 19 Esociformes Esocidae Esox Esox lucius (northern pike) 13 Gasterosteiformes Gasterosteidae Gasterosteus Gasterosteus aculeatus (three-spined stickleback, three spined stickleback) 42 Salmoniformes Salmonidae Salmo Salmo salar (Atlantic salmon) 64 Thymallus Thymallus thymallus (grayling) 6 Oncorhynchus Oncorhynchus nerka (sockeye salmon) 5 Oncorhynchus tshawytscha (Chinook salmon, king salmon) 4 Oncorhynchus mykiss (rainbow trout) 46 Salvelinus Salvelinus fontinalis (brook trout) 5 Coregonus Coregonus clupeaformis (lake whitefish) 2 Cyprinodontiformes Fundulidae Fundulus Fundulus heteroclitus (mummichog, Atlantic killifish, killifish) 23 Poeciliidae Poecilia Poecilia reticulata (guppy) 3 Beloniformes Adrianichthyidae Oryzias Oryzias latipes (Japanese medaka, Japanese rice fish, medaka) 54 Pleuronectiformes Scophthalmidae Psetta Psetta maxima (turbot) 3 Cynoglossidae Cynoglossus Cynoglossus semilaevis (tongue sole) 4 Paralichthyidae Paralichthys Paralichthys olivaceus (Japanese flounder, bastard halibut, false halibut, olive flounder) 3 Pleuronectidae Hippoglossus Hippoglossus hippoglossus (Atlantic halibut) 7 Soleidae Solea Solea senegalensis (Senegalese sole) 8 Elasmobranchii Torpediniformes Torpedinidae Torpedo Torpedo californica (Pacific electric ray) 3 Rajiformes Rajidae Leucoraja Leucoraja erinacea (little skate) 3 Squaliformes Squalidae Squalus Squalus acanthias (spiny dogfish) 8 Mammalia Perissodactyla Equidae Equus Equus caballus (horse, domestic horse, equine) 11 Carnivora Ursidae Ursus Ursus americanus (American black bear) 12 Rodentia Muridae Rattus Rattus norvegicus (Norway rat, brown rat, rat, rats) 160 Mus Mus musculus (house mouse, mouse) 322 Caviidae Cavia Cavia porcellus (Domestic guinea pig, guinea pig) 20 Diprotodontia Macropodidae Macropus Macropus eugenii (tammar wallaby) 8 Phalangeridae Trichosurus Trichosurus vulpecula (silver-gray brushtail possum, common brush-tailed possum) 45 Lagomorpha Leporidae Oryctolagus Oryctolagus cuniculus (rabbit, European rabbit, Japanese white rabbit, domestic rabbit, rabbits) 10 Primates Hominidae Pongo Pongo abelii (Sumatran orangutan, Orang-utan, Orangutan, orang utan) 48 Homo Homo sapiens (human, man) 542 Cercopithecidae Macaca Macaca nemestrina (pig-tailed macaque, pigtail macaque, pigtail monkey) 25 Macaca mulatta (rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys) 30 Macaca fascicularis (crab-eating macaque, crab eating macaque, cynomolgus monkey, cynomolgus monkeys, long-tailed macaque) 53 Papio Papio anubis (Olive baboon, Doguera baboon, Kenya baboon, baboon) 34 Amphibia Anura Pipidae Xenopus Xenopus laevis (African clawed frog, clawed frog, common platanna, platanna) 73 Ranidae Rana Rana catesbeiana (bullfrog, bullfrogs) 14 Caudata Salamandridae Cynops Cynops pyrrhogaster (Japanese firebelly newt, Japanese common newt) 3 Aves Galliformes Phasianidae Meleagris Meleagris gallopavo (turkey, common turkey, wild turkey) 5 Gallus Gallus gallus (chicken, bantam, chickens) 120 Passeriformes Estrildidae Taeniopygia Taeniopygia guttata (zebra finch) 30 no_rank Squamata Iguanidae Anolis Anolis carolinensis (green anole) 53 Petromyzontiformes Petromyzontidae Petromyzon Petromyzon marinus (sea lamprey, marine lamprey) 26 Myxiniformes Myxinidae Eptatretus Eptatretus burgeri (inshore hagfish) 2 Rotifera Monogononta Ploimida Brachionidae Brachionus Brachionus plicatilis 5 Hemichordata Enteropneusta no_rank no_rank Petrolisthes Petrolisthes cinctipes (flat porcelain crab) 15 Cnidaria Hydrozoa Hydroida Hydridae Hydra Hydra vulgaris 7 Campanulariidae Clytia Clytia hemisphaerica 1 Hexacorallia Scleractinia Poritidae Porites Porites astreoides 2 Acroporidae Acropora Acropora millepora 5 Acropora palmata (elkhorn coral) 9 Faviidae Montastraea Montastraea faveolata 7 Actiniaria Edwardsiidae Nematostella Nematostella vectensis (starlet sea anemone) 24 Actiniidae Anemonia Anemonia viridis 10 Metridiidae Metridium Metridium senile (brown sea anemone, frilled sea anemone) 3 Aiptasiidae Aiptasia Aiptasia pallida 2 Platyhelminthes Eucestoda Cyclophyllidea Taeniidae Taenia Taenia solium (pork tapeworm, pig tapeworm) 6 Digenea Strigeidida Schistosomatidae Schistosoma Schistosoma mansoni 19 Schistosoma japonicum 10 Turbellaria Tricladida Dugesiidae Schmidtea Schmidtea mediterranea (freshwater planarian) 10 Ctenophora no_rank Cydippida Pleurobrachiidae Pleurobrachia Pleurobrachia pileus 3 Lobata Bolinopsidae Mnemiopsis Mnemiopsis leidyi 2 Echinodermata Asteroidea Valvatida Asterinidae Patiria Patiria pectinifera 3 Euechinoidea Echinoida Echinidae Paracentrotus Paracentrotus lividus (common urchin, common sea urchin) 17 Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus (purple sea urchin, purple urchin) 43
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