ABOUT THIS RECORDspecies: Persea americana
miRNA family: MIRf920
source: miRNEST
Taxonomy by NCBI:
Persea americana Persea Lauraceae Laurales magnoliids Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ACGAGTCAAGTGATGGGTCTT miRNA* GGCTTTAACTTGATATCGTGT mismatches: 2 bulges: 2 |
pre-miRNA
GAATATGTTAAGGGCTTTAACTTGATATCGTGTACCTGAAATCTAGAATGTCGTTTAGCTTCAAGGGCACCAACTCACTTCCAAATTCCGACATTCGGGT
TTCAAGTACACACGAGTCAAGTGATGGGTCTTTGCATATGC
dot-bracket secondary structure
..((((((.((((((((..(((((((.((((((((.((((((((.((((((((...........(((......)))............))))))))))))
)))).))..)))))))))))))...))))))))))))))..
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GAATATGTTAAGGGCTTTAACTTGATATCGTGTACCTGAAATCTAGAATGTCGTTTAGCTTCAAGGGCACCAACTCACTTCCAAATTCCGACATTCGGGT
TTCAAGTACACACGAGTCAAGTGATGGGTCTTTGCATATGC
dot-bracket secondary structure
..((((((.((((((((..(((((((.((((((((.((((((((.((((((((...........(((......)))............))))))))))))
)))).))..)))))))))))))...))))))))))))))..
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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