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Species belonging to selected taxon:
Actinidia chinensis
,
Actinidia deliciosa
,
Actinidia eriantha
ABOUT THIS RECORD
ID:
MNEST000010
species:
Actinidia deliciosa
miRNA family:
MIRf1067
source:
miRNEST
Taxonomy by NCBI:
Actinidia deliciosa
Actinidia
Actinidiaceae
Ericales
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AGCTCGGTTCAGCTCGGTTAA
miRNA*
GTTCTGAGCTCGATTAAGCTC
mismatches:
3
bulges:
1
View larger
pre-miRNA
TG
AGCTCGGTTCAGCTCGGTTAA
CCCCTTCTCGCGATTGAACCCAGTTAACTTGTAAAAAGTAATGGACAAGCTCGGAACTCCTTTCGAGTTCGGCTAGC
TTTCACTTCATTTTTTACCAAGTGTAACTGGACTGAAGCGAACGAAGGTT
GTTCTGAGCTCGATTAAGCTC
dot-bracket secondary structure
.(
((((.((((.(((((((.(((
((..(((((((..(((...((((((((((((((((((((....((.(((((..((((((.....))))))....)))
)))).....)))))))).))))).)))))))..))).))))..)))))))
)..))))))).)))).)))))
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record