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Species belonging to selected taxon:

Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Pseudoroegneria spicata, Triticum monococcum, Triticum turgidum subsp. durum, Triticum aestivum



ABOUT THIS RECORD

ID: MNEST001011
species: Hordeum vulgare
miRNA family: MIR1436
source: miRNEST

Taxonomy by NCBI:
Hordeum vulgare Hordeum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTATTTTGGGACGGAGGGAGT

miRNA*
 TCCCTCCGTCCCAAAATAAGT

mismatches: 0
bulges: 0
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pre-miRNA
 CATTTCTTTGTTACTCCCTCCGTCCCAAAATAAGTGTCTCAACTTTGTATTAGCTCTAGTATAAAATTGTATTAAGCTTGAGACACTTATTTTGGGACGGA
GGGAGTACTATTTATC

dot-bracket secondary structure
).......((.((((((((((((((((((((((((((((((..........((((.(((((((....))))))))))))))))))))))))))))))))))
))))))).))......


SIMILARITIES
miRBase far-MIR1122: 2.0E-8

PMRD hpr-miR1120: 1.0E-10

microPC miR1439: 3.0E-38		UniProt no hits

RFAM 2MIR1122: 1.0E-34		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
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