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Species belonging to selected taxon:

Agrostis stolonifera, Avena barbata, Avena sativa, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Pseudoroegneria spicata, Triticum monococcum, Triticum turgidum subsp. durum, Brachypodium distachyon, Triticum aestivum



ABOUT THIS RECORD

ID: MNEST001019
species: Hordeum vulgare
miRNA family: MIR168
source: miRNEST

Taxonomy by NCBI:
Hordeum vulgare Hordeum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCGCTTGGTGCAGATCGGGAC

miRNA*
 CCCGCCTTGCACCAAGTGAAT

mismatches: 3
bulges: 0
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pre-miRNA
 TCCCCGCCCGTCCGTCGCCGCCGCCTCGGGCTCGCTTGGTGCAGATCGGGACCCTCCGCCCGCCCCGACGGGCCGGATCCCGCCTTGCACCAAGTGAATC
GGAGCCGGCGCAGCGACCACCACCACC

dot-bracket secondary structure
.............((((((((((.(((.((.(((((((((((((..(((((...((((((((......)))).)))))))))..))))))))))))).))
.))).)))))..)))))..........


SIMILARITIES
miRBase hvu-MIR168: 2e-55

PMRD sof-miR168a: 1e-37

microPC miR168: 1e-19		UniProt no hits

RFAM MIR168: 4e-35		most similar mature miRNAs

Identical with: hvv-miR168 from PMRD (MNEST048661)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
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