miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Pseudoroegneria spicata, Triticum monococcum, Triticum turgidum subsp. durum, Triticum aestivum



ABOUT THIS RECORD

ID: MNEST001025
species: Hordeum vulgare
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Hordeum vulgare Hordeum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CCTCCGTCCCAAAATAAGTAA

miRNA*
 ACTTACTTTGAGATGGAGGGA

mismatches: 2
bulges: 0
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pre-miRNA
 ACCAATCGAGTACTTCCTCCGTCCCAAAATAAGTAACTCAAAAATGACTCAAGAGAAGAGTCATTTGTGAGTTACTTACTTTGAGATGGAGGGAGTAGAA
CACAAT

dot-bracket secondary structure
..........(((((((((((((.((((.(((((((((((.(((((((((.......))))))))).))))))))))).)))).)))))))))))))...
......


SIMILARITIES
miRBase no hits

PMRD hpr-miR1120: 0.000005

microPC miR1439: 0.00002		UniProt no hits

RFAM MIR1122: 0.0000000001		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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