miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Agrostis stolonifera, Avena barbata, Avena sativa, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Pseudoroegneria spicata, Triticum monococcum, Triticum turgidum subsp. durum, Brachypodium distachyon, Triticum aestivum



ABOUT THIS RECORD

ID: MNEST001028
species: Hordeum vulgare
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Hordeum vulgare Hordeum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CCTCCGTCCCAAAATAAGTGA

miRNA*
 ACTTACTTTGAGATGGAGGGA

mismatches: 2
bulges: 0
View larger
pre-miRNA
 CCAATCGAGTACTTCCTCCGTCCCAAAATAAGTGACTCAAAAATGACTCAAGAGAAGAGTCATTTTTGAGTCACTTACTTTGAGATGGAGGGAGTAGAAC
ACAA

dot-bracket secondary structure
.........(((((((((((((.((((.(((((((((((((((((((((.......))))))))))))))))))))).)))).)))))))))))))....
....


SIMILARITIES
miRBase osa-MIR812a: 0.0003

PMRD hpr-miR1120: 0.00000002

microPC miR1439: 0.00000008		UniProt no hits

RFAM MIR1122: 0.0000000000004		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record




Liczniki na strone;