ABOUT THIS RECORDspecies: Arachis duranensis
miRNA family: MIR414
source: miRNEST
Taxonomy by NCBI:
Arachis duranensis Arachis Dalbergieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CTATCCTCATCATCATCTTCT miRNA* GAGCATGATGAGAAAGGGTTGTT mismatches: 3 bulges: 2 |
pre-miRNA
TTCAATATATGCTATCCTCATCATCATCTTCTTCCTCTATTTCTAAAGATCCTCCAATTTCTTCACCCACTTCTTTCAAAATCCCTAATTCGATTCAATT
TTGGAATCACTGAATCAGCCTTGATTATTATCTGATCTTGATCATGGGAGGTGGAAAGGAGCATGATGAGAAAGGGTTGTTTTCACACC
dot-bracket secondary structure
..........((.(((((..(((((((((((((..(((((((((...((((.(((((.....((...........................)).......
)))))((((...(((((....)))))......))))...))))...))))))))))))))).)))))))...))))).)).........
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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TTCAATATATGCTATCCTCATCATCATCTTCTTCCTCTATTTCTAAAGATCCTCCAATTTCTTCACCCACTTCTTTCAAAATCCCTAATTCGATTCAATT
TTGGAATCACTGAATCAGCCTTGATTATTATCTGATCTTGATCATGGGAGGTGGAAAGGAGCATGATGAGAAAGGGTTGTTTTCACACC
dot-bracket secondary structure
..........((.(((((..(((((((((((((..(((((((((...((((.(((((.....((...........................)).......
)))))((((...(((((....)))))......))))...))))...))))))))))))))).)))))))...))))).)).........
SIMILARITIES| miRBase osa-MIR164a: 0.0006 PMRD osa-miRf11199-akr: 0.0006 microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
