ABOUT THIS RECORDspecies: Hordeum vulgare
miRNA family: MIR1436
source: miRNEST
Taxonomy by NCBI:
Hordeum vulgare Hordeum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTATTTTGGGACGGAGGGAGT miRNA* TCCCTCCGTCCCAAAATAACT mismatches: 0 bulges: 0 |
pre-miRNA
TGCATACAAATAGGTACAACTTTGTACTCCCTCCGTCCCAAAATAACTATCTCAACTTTATACTAGATCTAGTATAAATTTGTACTAAGCTTAAGACAGT
TATTTTGGGACGGAGGGAGTACTAGTAAAGTACTCTAATTTCAA
dot-bracket secondary structure
..........(((((((.(((..(((((((((((((((((((((((((.((((((.(((((((((....))))))))).)))...........))).)))
)))))))))))))))))))))).)))...)))).))).......
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
download this record
TGCATACAAATAGGTACAACTTTGTACTCCCTCCGTCCCAAAATAACTATCTCAACTTTATACTAGATCTAGTATAAATTTGTACTAAGCTTAAGACAGT
TATTTTGGGACGGAGGGAGTACTAGTAAAGTACTCTAATTTCAA
dot-bracket secondary structure
..........(((((((.(((..(((((((((((((((((((((((((.((((((.(((((((((....))))))))).)))...........))).)))
)))))))))))))))))))))).)))...)))).))).......
SIMILARITIES| miRBase osa-MIR1862e: 0.00003 PMRD hpr-miR1120: 0.000000002 microPC miR1439: 6e-31 | UniProt no hits RFAM MIR1122: 5e-44 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
download this record
