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Species belonging to selected taxon:

Hordeum vulgare, Hordeum vulgare subsp. spontaneum



ABOUT THIS RECORD

ID: MNEST001063
species: Hordeum vulgare
miRNA family: MIR1439
source: miRNEST

Taxonomy by NCBI:
Hordeum vulgare Hordeum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTTTGGAACGGAGGGAGTACT

miRNA*
 TACTCCCTCCGTCCCAAAATA

mismatches: 2
bulges: 0
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pre-miRNA
 TTTGTTACTCCCTCCGTCCCAAAATAAGTGTCTCAAAGTGTCTCAACTTTGTATTAGCTGTAGTATAAAATTGTATTAAGCTTGAGATACTTATTTTGGA
ACGGAGGGAGTACTAT

dot-bracket secondary structure
..((.((((((((((((.((((((((((((((((((.((....(((.(((((((((....))))))))).)))......)))))))))))))))))))).
)))))))))))).)).


SIMILARITIES
miRBase osa-MIR1862c: 0.000006

PMRD hpr-miR1120: 0.00000002

microPC miR1439: 7e-27		UniProt no hits

RFAM MIR1122: 3e-23		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
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