miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Arachis duranensis, Arachis hypogaea, Arachis ipaensis, Glycine soja, Glycyrrhiza uralensis, Lotus japonicus, Medicago sativa, Phaseolus acutifolius, Phaseolus coccineus, Pisum sativum, Trifolium pratense, Cajanus cajan, Cicer arietinum, Glycine max, Vigna unguiculata, Medicago truncatula, Phaseolus vulgaris



ABOUT THIS RECORD

ID: MNEST000113
species: Arachis hypogaea
miRNA family: miR3509-3p
source: miRNEST

Taxonomy by NCBI:
Arachis hypogaea Arachis Dalbergieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 ATCTAACGACTCTTAGATATC

miRNA*
 TATTTGATAGCCATTAGATGA

mismatches: 4
bulges: 0
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pre-miRNA
 ACCTGTCAACAGGTTAATGTATACTTAATTGAATTGTTTAATGGTGAAAATTTCAGGTGCAATCGACTTCACATGAAGTTGATATTTGATAGCCATTAGA
TGATTTGACTGATTTAACTAAATTTTTATCTAACGACTCTTAGATATCAACTTCACGTGAAGTCGATTTCACGTGAGTTTTCATCTTGTTTAATACATTT
GATAAGTTAAAATATATTGAAAAGAGT

dot-bracket secondary structure
(((((....)))))(((((((((((((.((((((...((((.((((((((((.((.(((.((((((((((((.((((((((((((((((.((...(((((
(((.......(((((....))))).))))))))...)).)))))))))))))))).)))))))))))).))).))))))))))))....))))...))))
)))))))....))))))))........


SIMILARITIES
miRBase ahy-MIR3509: 2e-29

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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