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Species belonging to selected taxon:
Hordeum vulgare
,
Hordeum vulgare subsp. spontaneum
ABOUT THIS RECORD
ID:
MNEST001177
species:
Hordeum vulgare
miRNA family:
MIRf341
source:
miRNEST
Taxonomy by NCBI:
Hordeum vulgare
Hordeum
Triticeae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
ATACTCCCTCCGTCCTAAAAT
miRNA*
TTTAAAACGGAGAAAGTATTA
mismatches:
4
bulges:
0
View larger
pre-miRNA
TCTAGTAACAG
ATACTCCCTCCGTCCTAAAAT
TCTTGTCTTAGATTTGTCTAGATATGAATATCAAGTATTTAGATACATTCATTTCTAGATAAACCTAA
TACAAGAAT
TTTAAAACGGAGAAAGTATTA
TATTTTAT
dot-bracket secondary structure
..........(
(((((..((((((..((((((
((((((.((((.((((((((((.(((((((((.........))))..))))).)))))))))).))))
.))))))))
))))..))))))..)))))).
........
SIMILARITIES
miRBase
tae-MIR1122
:
0.00000000000003
PMRD
hpi-miR1122
:
0.000000000000002
microPC
miR1133
:
0.0004
UniProt
no hits
RFAM
MIR1122: 2e-59
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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