ABOUT THIS RECORDspecies: Actinidia deliciosa
miRNA family: MIR2021
source: miRNEST
Taxonomy by NCBI:
Actinidia deliciosa Actinidia Actinidiaceae Ericales asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ATTTGTCACATATAATGCACT miRNA* GCTTTGTGTGTTGCAAATGA mismatches: 2 bulges: 1 |
pre-miRNA
GCCTTGGTAGGTTTGAGGAGGCTTTGTGTGTTGCAAATGACATGGAGAGTATGGGGATTAAGAAGGATTTGTCACATATAATGCACTTCTGGATGGATTT
GGGAAACAAGGGAAGT
dot-bracket secondary structure
.(((((.(((((((((((((((.((((((((.((((((............................)))))).)))))))).)).)))))...)))))))
).....))))).....
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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GCCTTGGTAGGTTTGAGGAGGCTTTGTGTGTTGCAAATGACATGGAGAGTATGGGGATTAAGAAGGATTTGTCACATATAATGCACTTCTGGATGGATTT
GGGAAACAAGGGAAGT
dot-bracket secondary structure
.(((((.(((((((((((((((.((((((((.((((((............................)))))).)))))))).)).)))))...)))))))
).....))))).....
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
