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Species belonging to selected taxon:

Hordeum vulgare subsp. spontaneum



ABOUT THIS RECORD

ID: MNEST001247
species: Hordeum vulgare subsp. spontaneum
miRNA family: MIR1120
source: miRNEST

Taxonomy by NCBI:
Hordeum vulgare subsp. spontaneum Hordeum vulgare Hordeum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CTCCGTAAACTAATATAAGAG

miRNA*
TTAATATTAGTTGACAGAGGG

mismatches: 3
bulges: 0

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pre-miRNA
TTTTCTACTCCCTCCGTAAACTAATATAAGAGCATTTAGAACACTATTTTAATAATCTAAACGCTTTAATATTAGTTGACAGAGGGAGAATTTC

dot-bracket secondary structure
.......(((((((.((.(((((((((.(((((.((((((....(((....))).)))))).))))).))))))))).)).)))))))......


SIMILARITIES
miRBase tae-MIR1121: 0.00000000007

PMRD tmo-miR1120: 0.000000000001

microPC miR1121: 0.000004
UniProt no hits

RFAM MIR1122: 4e-22
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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