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Species belonging to selected taxon:

Agrostis stolonifera, Oryza sativa, Avena barbata, Avena sativa, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Pseudoroegneria spicata, Triticum monococcum, Triticum turgidum subsp. durum, Brachypodium distachyon, Triticum aestivum



ABOUT THIS RECORD

ID: MNEST001259
species: Hordeum vulgare subsp. spontaneum
miRNA family: MIR1120
source: miRNEST

Taxonomy by NCBI:
Hordeum vulgare subsp. spontaneum Hordeum vulgare Hordeum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CTCTGTAAACAAATATAAGAG

miRNA*
 CTTATATTTCTTTAAGGAGGA

mismatches: 2
bulges: 0
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pre-miRNA
 GTTTCTACTCTCTCTGTAAACAAATATAAGAGCATTTAGATCACTAAAGTAGTGATTTAAACGCTCTTATATTTCTTTAAGGAGGAATATATAT

dot-bracket secondary structure
..........(((((.((((.((((((((((((.((((((((((((...)))))))))))).)))))))))))).)))).))))).........


SIMILARITIES
miRBase tae-MIR1121: 5e-21

PMRD tae-miR1121: 5e-21

microPC miR1121: 0.000000001		UniProt no hits

RFAM MIR1122: 4e-22		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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