ABOUT THIS RECORDspecies: Humulus lupulus
miRNA family: MIR414
source: miRNEST
Taxonomy by NCBI:
Humulus lupulus Humulus Cannabaceae Rosales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCTTCTTCATCATCATCGTCG miRNA* GAAGAGAAGAGAGAGAAGACA mismatches: 4 bulges: 2 |
pre-miRNA
TAGAGAGAGAGAAGACAGAACGGAAGAGAAGAGAGAGAAGACAGAATCCCAACCCTAATGGCGTTGCGGAGTCTCGCACTACCTCTGGCTTCAGCTCCCG
CAGTCTCGCCAAGGTCTTCTTCTTCATCATCATCGTCGTCGTCGTCGTCGTGTTTTT
dot-bracket secondary structure
....(((((.((.(((.((((((..((((.((..(((((((.(((........(((..((((((((((((((...((..........))....))).)))
)))...))))))))))))))))))..)).)).)).))))..))))).))...)))))
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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TAGAGAGAGAGAAGACAGAACGGAAGAGAAGAGAGAGAAGACAGAATCCCAACCCTAATGGCGTTGCGGAGTCTCGCACTACCTCTGGCTTCAGCTCCCG
CAGTCTCGCCAAGGTCTTCTTCTTCATCATCATCGTCGTCGTCGTCGTCGTGTTTTT
dot-bracket secondary structure
....(((((.((.(((.((((((..((((.((..(((((((.(((........(((..((((((((((((((...((..........))....))).)))
)))...))))))))))))))))))..)).)).)).))))..))))).))...)))))
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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