miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Arachis hypogaea



ABOUT THIS RECORD

ID: MNEST000127
species: Arachis hypogaea
miRNA family: MIR157
source: miRNEST

Taxonomy by NCBI:
Arachis hypogaea Arachis Dalbergieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGACAGAAGATAGAGAGCAC

miRNA*
 GCTCTCTAAGCTTCTGTCATC

mismatches: 1
bulges: 1
View larger
pre-miRNA
 GCACTATTGGTAGAGTTGTTGACAGAAGATAGAGAGCACAAAAGATGATATGCATATAGATATATAGTCACATACATACACATATGGATGGATCAAAAGC
CAATTGCATTTTATTTCTTTGTGCTCTCTAAGCTTCTGTCATCACTCTTCAGCCTCCAT

dot-bracket secondary structure
........((((((((...(((((((((.(((((((((((((((((((.(((((............(((.(((.((((....)))).)))))).......
....))))).)))))).)))))))))))))..)))))))))..)))))...))).....


SIMILARITIES
miRBase ahy-MIR156b: 2e-31

PMRD mtr-miR156e: 0.0000000000001

microPC miR157: 0.000000008		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record




Liczniki na strone;