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Species belonging to selected taxon:

Euphorbia esula, Hevea brasiliensis, Jatropha curcas, Linum usitatissimum, Manihot esculenta, Populus deltoides, Populus euphratica, Populus nigra, Populus tremula, Populus tremula x Populus alba, Populus tremula x Populus tremuloides, Populus tremuloides, Populus trichocarpa x Populus nigra, Populus x canadensis, Bruguiera gymnorhiza, Populus trichocarpa, Ricinus communis, Populus trichocarpa x Populus deltoides



ABOUT THIS RECORD

ID: MNEST001282
species: Jatropha curcas
miRNA family: MIR167
source: miRNEST

Taxonomy by NCBI:
Jatropha curcas Jatropha Jatropheae Crotonoideae Euphorbiaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGAAGCTGCCAGCATGATCTT

miRNA*
 GATCATGTGGCAGCTTCACC

mismatches: 1
bulges: 1
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pre-miRNA
 ACACTATCAGTTGAAGCTGCCAGCATGATCTTAACCTTCCTCCATAGTTGAGGAAAGATCAGATCATGTGGCAGCTTCACCCGTTGTGG

dot-bracket secondary structure
.(((.......(((((((((((.((((((((.....((((((.......)))))).....)))))))))))))))))))......))).


SIMILARITIES
miRBase ptc-MIR167g: 8e-26

PMRD ptc-miR167g: 8e-26

microPC miR167: 0.00000000000002		UniProt no hits

RFAM MIR167_1: 4e-28		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record




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