ABOUT THIS RECORDspecies: Juglans hindsii x Juglans regia
miRNA family: MIR482
source: miRNEST
Taxonomy by NCBI:
Juglans hindsii x Juglans regia Juglans Juglandaceae Fagales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCTTCCCTACTCCGCCCATGC miRNA* ATGGGCGGGTGGGGAAGATA mismatches: 0 bulges: 1 |
pre-miRNA
GATGGTGGAAGAATCTGGGAGAGGGGGTTTTGGATATTCGGAAGGCTTTGGCATGGGCGGGTGGGGAAGATAACTTTTATTAATTTGTGTCTTCCCTACT
CCGCCCATGCCATAGGTTTCCGATTGTTCCTCCCTCTCACTCTTGCTTTCTCTGCCCTA
dot-bracket secondary structure
...((((((.(((...(((.(((((((....(((...(((((((.((.((((((((((((((((((((((((...............)))))))))))).
)))))))))))).)).)))))))....))).))))))).))).....)))))))))...
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GATGGTGGAAGAATCTGGGAGAGGGGGTTTTGGATATTCGGAAGGCTTTGGCATGGGCGGGTGGGGAAGATAACTTTTATTAATTTGTGTCTTCCCTACT
CCGCCCATGCCATAGGTTTCCGATTGTTCCTCCCTCTCACTCTTGCTTTCTCTGCCCTA
dot-bracket secondary structure
...((((((.(((...(((.(((((((....(((...(((((((.((.((((((((((((((((((((((((...............)))))))))))).
)))))))))))).)).)))))))....))).))))))).))).....)))))))))...
SIMILARITIES| miRBase no hits PMRD no hits microPC miR482: 2e-25 | UniProt no hits RFAM no hits | most similar mature miRNAs |
Identical with: miR482 from microPC (MNEST045126) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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