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Species belonging to selected taxon:

Barnadesia spinosa, Cichorium intybus, Gerbera hybrid cultivar, Guizotia abyssinica, Helianthus argophyllus, Helianthus ciliaris, Helianthus exilis, Helianthus paradoxus, Helianthus petiolaris, Helianthus tuberosus, Lactuca perennis, Lactuca saligna, Lactuca sativa, Lactuca serriola, Lactuca virosa, Panax ginseng, Parthenium argentatum, Taraxacum kok-saghyz, Taraxacum officinale, Zinnia violacea, Carthamus tinctorius, Centaurea maculosa, Centaurea solstitialis, Cichorium endivia, Artemisia annua, Helianthus annuus



ABOUT THIS RECORD

ID: MNEST001324
species: Lactuca sativa
miRNA family: MIR157
source: miRNEST

Taxonomy by NCBI:
Lactuca sativa Lactuca Lactucinae Cichorieae Cichorioideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GTGACAGAAGAGAGTGAGCAC

miRNA*
 GCTCACCCTCTGTCTGTCACCC

mismatches: 1
bulges: 1
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pre-miRNA
 TAAGGGTGGTGGTGACAGAAGAGAGTGAGCACCCATGGTCTTTCTCGCAAATAGTGCGCTTTCATGTGCTTGAAGCTATGCGTGCTCACCCTCTGTCTGTC
ACCCCTGCTAT

dot-bracket secondary structure
)...(((((.(((((((((((((.((((((((.((((((..(((..(((....(((......))).)))..))))))))).)))))))).)))).))))))
))).)))))..


SIMILARITIES
miRBase aly-MIR156f: 1.0E-9

PMRD ptc-miRf10647-akr: 6.0E-9

microPC miR156: 2.0E-45		UniProt no hits

RFAM 6mir-156: 2.0E-6		most similar mature miRNAs

Identical with: miR156 from microPC (MNEST046706)

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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