ABOUT THIS RECORDspecies: Leymus cinereus x Leymus triticoides
miRNA family: MIR1120
source: miRNEST
Taxonomy by NCBI:
Leymus cinereus x Leymus triticoides Leymus Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCCCTCCGTAAAGAAATATAA miRNA* CTATTTCTTTAGAGGGAGT mismatches: 3 bulges: 2 |
pre-miRNA
TTAGTTAATACTCCCTCCGTAAAGAAATATAAGAGCGTTTAGATCACTATTTCTTTAGAGGGAGTACAAGAGT
dot-bracket secondary structure
........(((((((((..((((((((((...((.........))..))))))))))))))))))).......
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
TTAGTTAATACTCCCTCCGTAAAGAAATATAAGAGCGTTTAGATCACTATTTCTTTAGAGGGAGTACAAGAGT
dot-bracket secondary structure
........(((((((((..((((((((((...((.........))..))))))))))))))))))).......
SIMILARITIES| miRBase tae-MIR1121: 6e-17 PMRD tae-miR1121: 6e-17 microPC miR1121: 0.0002 | UniProt no hits RFAM MIR1122: 0.00000000000007 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
